RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RRP8O43159 456 aaKnown RBP16.47■□□□□ 0.23
SNX4-201ENST00000251775 COX6A1P12074 109 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 SSTP61278 116 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 H3F3AP84243 136 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 LFNGQ8NES3 379 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 NPRL2Q8WTW4 380 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 LIME1Q9H400 295 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 PROK2Q9HC23 129 aa16.47■□□□□ 0.23
SNX4-201ENST00000251775 G3V3Y1 287 aa16.46■□□□□ 0.23
SNX4-201ENST00000251775 GPR37O15354 613 aa16.46■□□□□ 0.23
SNX4-201ENST00000251775 KLF7O75840 302 aaPredicted RBP16.46■□□□□ 0.23
SNX4-201ENST00000251775 NHLH2Q02577 135 aa16.46■□□□□ 0.23
SNX4-201ENST00000251775 GPR157Q5UAW9 335 aa16.46■□□□□ 0.23
SNX4-201ENST00000251775 TMEM182Q6ZP80 229 aaPredicted RBP16.46■□□□□ 0.23
SNX4-201ENST00000251775 OR14K1Q8NGZ2 314 aa16.46■□□□□ 0.23
SNX4-201ENST00000251775 GALNT14Q96FL9 552 aa16.46■□□□□ 0.23
SNX4-201ENST00000251775 HDHD3Q9BSH5 251 aaPredicted RBP16.46■□□□□ 0.23
SNX4-201ENST00000251775 IGHV3-15A0A0B4J1V0 119 aa16.46■□□□□ 0.22
SNX4-201ENST00000251775 MSTNO14793 375 aa16.46■□□□□ 0.22
SNX4-201ENST00000251775 FKBP2P26885 142 aaKnown RBP16.46■□□□□ 0.22
SNX4-201ENST00000251775 PIGPP57054 158 aa16.46■□□□□ 0.22
SNX4-201ENST00000251775 DOK3Q7L591 496 aa16.46■□□□□ 0.22
SNX4-201ENST00000251775 C6orf201Q7Z4U5 140 aa16.46■□□□□ 0.22
SNX4-201ENST00000251775 ZNF700Q9H0M5 742 aa16.46■□□□□ 0.22
SNX4-201ENST00000251775 HS3ST3B1Q9Y662 390 aa16.46■□□□□ 0.22
SNX4-201ENST00000251775 CFAP54Q96N23 3096 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 CCDC163A0A0D9SF12 145 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 PATE3B3GLJ2 98 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 STMND1H3BQB6 276 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 H7C1Q1 480 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 CXCL1P09341 107 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 ALDH3B1P43353 468 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 TMEM187Q14656 261 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 ZNF343Q6P1L6 599 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 SPNS3Q6ZMD2 512 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 LYZL2Q7Z4W2 148 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 LIN37Q96GY3 246 aaPredicted RBP16.45■□□□□ 0.22
SNX4-201ENST00000251775 C14orf144Q96I85 54 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 RHOVQ96L33 236 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 ZNF385AQ96PM9 386 aaKnown RBP16.45■□□□□ 0.22
SNX4-201ENST00000251775 TM2D1Q9BX74 207 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 MYO7BQ6PIF6 2116 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 TLX3O43711 291 aaPredicted RBP16.45■□□□□ 0.22
SNX4-201ENST00000251775 OR5AC1P0C628 307 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 CCL20P78556 96 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 ELOBQ15370 118 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 HIKESHIQ53FT3 197 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 ZNF610Q8N9Z0 462 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 Q8WTZ3 238 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 NTNG2Q96CW9 530 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 ANGPTL4Q9BY76 406 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 SMDT1Q9H4I9 107 aa16.45■□□□□ 0.22
SNX4-201ENST00000251775 KIAA1549Q9HCM3 1950 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 A0A087WZY1 265 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 H3BQ15 152 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 HOXA6P31267 233 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 GRB2P62993 217 aaKnown RBP16.44■□□□□ 0.22
SNX4-201ENST00000251775 OR52M1Q8NGK5 317 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 OR10D4PQ8NGN7 298 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 RAB39BQ96DA2 213 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 JSRP1Q96MG2 331 aaPredicted RBP16.44■□□□□ 0.22
SNX4-201ENST00000251775 UCN2Q96RP3 112 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 RCL1Q9Y2P8 373 aaKnown RBP16.44■□□□□ 0.22
SNX4-201ENST00000251775 ZIC3O60481 467 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 CA11O75493 328 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 LIFP15018 202 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 CSNK1A1P48729 337 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 ZNF674Q2M3X9 581 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 RAET1LQ5VY80 246 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 DTX1Q86Y01 620 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 LYZL4Q96KX0 146 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 RFNGQ9Y644 331 aa16.44■□□□□ 0.22
SNX4-201ENST00000251775 WDFY3Q8IZQ1 3526 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 NSG1A0A0A6YYJ2 146 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 PDGFBP01127 241 aaPredicted RBP16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST1H1BP16401 226 aaKnown RBP16.43■□□□□ 0.22
SNX4-201ENST00000251775 LSM6P62312 80 aaKnown RBP16.43■□□□□ 0.22
SNX4-201ENST00000251775 ENDOGQ14249 297 aaKnown RBP16.43■□□□□ 0.22
SNX4-201ENST00000251775 EXT1Q16394 746 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 REEP6Q96HR9 211 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 NAA60Q9H7X0 242 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 UFSP2Q9NUQ7 469 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 ANXA10Q9UJ72 324 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 KCNIP3Q9Y2W7 256 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 CNTRLQ7Z7A1 2325 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 RBFOX3A6NFN3 312 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 NTN3O00634 580 aaPredicted RBP16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST1H2BKO60814 126 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST1H2BJP06899 126 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 MSR1P21757 451 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST1H2BOP23527 126 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST1H2BBP33778 126 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST1H2BDP58876 126 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST1H2BCP62807 126 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HAGHQ16775 308 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST2H2BEQ16778 126 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.43■□□□□ 0.22
SNX4-201ENST00000251775 TSPO2Q5TGU0 170 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 AGBL5Q8NDL9 886 aa16.43■□□□□ 0.22
SNX4-201ENST00000251775 GTF3AQ92664 365 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms