RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 DNAAF1Q8NEP3 725 aa17.01■□□□□ 0.31
NEDD8-201ENST00000250495 EMG1Q92979 244 aaKnown RBP17.01■□□□□ 0.31
NEDD8-201ENST00000250495 EME1Q96AY2 570 aa17.01■□□□□ 0.31
NEDD8-201ENST00000250495 TMEM82A0PJX8 343 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 MEGF11A6BM72 1044 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 A6NDX4 124 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 H3BUI4 141 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 HAND1O96004 215 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 DYNLT3P51808 116 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 EMX1Q04741 257 aaPredicted RBP17■□□□□ 0.31
NEDD8-201ENST00000250495 EDDM3AQ14507 147 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 TMEM244Q5VVB8 128 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 CCBE1Q6UXH8 406 aaPredicted RBP17■□□□□ 0.31
NEDD8-201ENST00000250495 Q8N2B8 174 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 CENPNQ96H22 339 aaPredicted RBP17■□□□□ 0.31
NEDD8-201ENST00000250495 GABARAPL3Q9BY60 117 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 PRSS22Q9GZN4 317 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 RIBC2Q9H4K1 309 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 ZNF702PQ9H963 129 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 GLS2Q9UI32 602 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 GNG8Q9UK08 70 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 LINC00312Q9Y6C7 94 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 PLXNB1O43157 2135 aa17■□□□□ 0.31
NEDD8-201ENST00000250495 PRKDCP78527 4128 aaKnown RBP16.99■□□□□ 0.31
NEDD8-201ENST00000250495 LOC107986453A0A1B0GWG9 222 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 MEX3AA1L020 520 aaKnown RBP16.99■□□□□ 0.31
NEDD8-201ENST00000250495 H0YJX3 145 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 GABRR1P24046 479 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 CDC42P60953 191 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 ACTA2P62736 377 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 ACTG2P63267 376 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 ACTC1P68032 377 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 ACTA1P68133 377 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 GRK1Q15835 563 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 MINOS1Q5TGZ0 78 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 ZBTB49Q6ZSB9 765 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 KCTD20Q7Z5Y7 419 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 RDH10Q8IZV5 341 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 FAM58AQ8N1B3 248 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 ZNF676Q8N7Q3 588 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 TRUB1Q8WWH5 349 aaKnown RBP16.99■□□□□ 0.31
NEDD8-201ENST00000250495 OSBPL10Q9BXB5 764 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 VCXQ9H320 206 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 SERTAD4Q9NUC0 356 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 MINOS1-NBL1R4GNA1 71 aa16.99■□□□□ 0.31
NEDD8-201ENST00000250495 G3V4G9 280 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 PEX14O75381 377 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 FBXO24O75426 580 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 PRKACBP22694 351 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 HSPA13P48723 471 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 MTCP1P56278 107 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 ISL1P61371 349 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 ZNF85Q03923 595 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 ZNF91Q05481 1191 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 TP53I3Q53FA7 332 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 LDLRAD2Q5SZI1 272 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 HIST2H2BDQ6DRA6 164 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 TMEM219Q86XT9 240 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 OR52N4Q8NGI2 321 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 OAZ3Q9UMX2 235 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 SESN1Q9Y6P5 492 aa16.98■□□□□ 0.31
NEDD8-201ENST00000250495 TRBV2A0A0J9YWF9 115 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 MGST3O14880 152 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 IGHA1P01876 353 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 ATF1P18846 271 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 KIR3DL2P43630 455 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 NPBWR2P48146 333 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 HABP2Q14520 560 aaPredicted RBP16.97■□□□□ 0.31
NEDD8-201ENST00000250495 ZNF146Q15072 292 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 BEAN1Q3B7T3 259 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 LPCAT4Q643R3 524 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 UTS2BQ765I0 119 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 TCF23Q7RTU1 214 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 OR2G2Q8NGZ5 317 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 NR1H4Q96RI1 486 aaPredicted RBP16.97■□□□□ 0.31
NEDD8-201ENST00000250495 CHST6Q9GZX3 395 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 BATF3Q9NR55 127 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 RBFOX1Q9NWB1 397 aaKnown RBP16.97■□□□□ 0.31
NEDD8-201ENST00000250495 HILPDAQ9Y5L2 63 aa16.97■□□□□ 0.31
NEDD8-201ENST00000250495 F2RL2O00254 374 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 RPSAP08865 295 aaKnown RBP16.96■□□□□ 0.31
NEDD8-201ENST00000250495 ZNF20P17024 532 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 BCL3P20749 454 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 AZGP1P25311 298 aaKnown RBP16.96■□□□□ 0.31
NEDD8-201ENST00000250495 DUSP1P28562 367 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 ERP29P30040 261 aaKnown RBP16.96■□□□□ 0.31
NEDD8-201ENST00000250495 POU3F4P49335 361 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 NSUN5P1Q3KNT7 163 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 ARSJQ5FYB0 599 aaPredicted RBP16.96■□□□□ 0.31
NEDD8-201ENST00000250495 SPIN3Q5JUX0 258 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 SAMD5Q5TGI4 173 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 LHFPL2Q6ZUX7 228 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 TPRX1Q8N7U7 411 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 OR4S1Q8NGB4 309 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 NDNFQ8TB73 568 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 FGGYQ96C11 551 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 ADAT3Q96EY9 351 aaPredicted RBP16.96■□□□□ 0.31
NEDD8-201ENST00000250495 CLEC7AQ9BXN2 247 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 TMEM133Q9H2Q1 129 aa16.96■□□□□ 0.31
NEDD8-201ENST00000250495 C8orf4Q9NR00 106 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms