RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RPL31P62899 125 aaKnown RBP10.49□□□□□ -0.73
VPREB3-201ENST00000248948 PPP3R1P63098 170 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 ACTG1P63261 375 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 BDH1Q02338 343 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 COL10A1Q03692 680 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 BAMBIQ13145 260 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 KISS1Q15726 138 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 RUSC1-AS1Q66K80 236 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 ASPHD2Q6ICH7 369 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 CRIP3Q6Q6R5 217 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 FAM185AQ8N0U4 392 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 Q8N7P7 452 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 ASCC1Q8N9N2 400 aaKnown RBP10.49□□□□□ -0.73
VPREB3-201ENST00000248948 OR5D13Q8NGL4 314 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 THRSPQ92748 146 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 RFT1Q96AA3 541 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 C1orf147Q96MC9 270 aaPredicted RBP10.49□□□□□ -0.73
VPREB3-201ENST00000248948 MND1Q9BWT6 205 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 HMG20AQ9NP66 347 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 SIRT7Q9NRC8 400 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 TAS2R4Q9NYW5 299 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 GLS2Q9UI32 602 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 ERGIC3Q9Y282 383 aa10.49□□□□□ -0.73
VPREB3-201ENST00000248948 SIRT4Q9Y6E7 314 aaPredicted RBP10.49□□□□□ -0.73
VPREB3-201ENST00000248948 IGKV1-12A0A0C4DH73 117 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 TRBV5-5A0A0J9YX44 114 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 hCG_1809904A0A1W2PP81 198 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 A0A1W2PPE2 198 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 A0A1W2PR64 198 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 A0A1W2PRV1 198 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 ANGPTL7O43827 346 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 IGKV1D-12P01611 117 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 RBP4P02753 201 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 ALDOBP05062 364 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 CDK1P06493 297 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 PRKACAP17612 351 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 C21orf33P30042 268 aaPredicted RBP10.48□□□□□ -0.73
VPREB3-201ENST00000248948 NPBWR2P48146 333 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 SOX2P48431 317 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 RIPK1Q13546 671 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 DEFB112Q30KQ8 113 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 Q499Y3 187 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 C6orf141Q5SZD1 244 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 GDPD3Q7L5L3 318 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 LDLRAD3Q86YD5 345 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 TMEM86BQ8N661 226 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 PXT1Q8NFP0 134 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 OR5D18Q8NGL1 313 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 GHSRQ92847 366 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 TNFRSF14Q92956 283 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 MYDGFQ969H8 173 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 SLC25A28Q96A46 364 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 SNX22Q96L94 193 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 SPACA5Q96QH8 159 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 CDCA4Q9BXL8 241 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 TMEM138Q9NPI0 162 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 SCN3BQ9NY72 215 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 CKLFQ9UBR5 152 aa10.48□□□□□ -0.73
VPREB3-201ENST00000248948 TENM1Q9UKZ4 2725 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 MDFIC2A0A1B0GVS7 189 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 RNASEK-C17orf49H0YIS7 233 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 GABRPO00591 440 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 EEF1B2P24534 225 aaKnown RBP10.47□□□□□ -0.73
VPREB3-201ENST00000248948 MTNR1BP49286 362 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 COMPP49747 757 aaPredicted RBP10.47□□□□□ -0.73
VPREB3-201ENST00000248948 UBE2E1P51965 193 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 SLC35A2P78381 396 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 ACSM1Q08AH1 577 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 IZUMO2Q6UXV1 221 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 Q6YL49 198 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 NANOGP1Q8N7R0 232 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 CHST4Q8NCG5 386 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 OR51A2Q8NGJ7 313 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 PPP1R35Q8TAP8 253 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 ZDHHC16Q969W1 377 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 EXOSC4Q9NPD3 245 aaKnown RBP10.47□□□□□ -0.73
VPREB3-201ENST00000248948 IL36RNQ9UBH0 155 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 TPRKBQ9Y3C4 175 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 POMT1Q9Y6A1 747 aa10.47□□□□□ -0.73
VPREB3-201ENST00000248948 TMEM82A0PJX8 343 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 TMEM89A2RUT3 159 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 MGST3O14880 152 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 NPFFO15130 113 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 HOXA3O43365 443 aaPredicted RBP10.46□□□□□ -0.73
VPREB3-201ENST00000248948 GPX5O75715 221 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 CSN2P05814 226 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 MELTFP08582 738 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 FBP1P09467 338 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 TMEM225BP0DP42 221 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 IGFBP3P17936 291 aaPredicted RBP10.46□□□□□ -0.73
VPREB3-201ENST00000248948 MAPK3P27361 379 aaPredicted RBP10.46□□□□□ -0.73
VPREB3-201ENST00000248948 BDKRB2P30411 391 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 RPS11P62280 158 aaKnown RBP eCLIP10.46□□□□□ -0.73
VPREB3-201ENST00000248948 MEF2CQ06413 473 aaPredicted RBP10.46□□□□□ -0.73
VPREB3-201ENST00000248948 ZNF273Q14593 569 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 DDI2Q5TDH0 399 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 TMEM200BQ69YZ2 307 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 ELP2Q6IA86 826 aa10.46□□□□□ -0.73
VPREB3-201ENST00000248948 C17orf107Q6ZR85 190 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms