RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 OR2D2Q9H210 308 aa6.51□□□□□ -1.37
SSR1-201ENST00000244763 RHOFQ9HBH0 211 aa6.51□□□□□ -1.37
SSR1-201ENST00000244763 PI3P19957 117 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 ZNF770Q6IQ21 691 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 ZNF683Q8IZ20 524 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 DUSP18Q8NEJ0 188 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 C3orf80F5H4A9 247 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 TO15178 435 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 SURF2Q15527 256 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 TMEM97Q5BJF2 176 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 ARHGAP5-AS1Q96IT6 56 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 AUNIPQ9H7T9 357 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 NAA60Q9H7X0 242 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 SIPA1L3O60292 1781 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 CYR61O00622 381 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 CDK2AP1O14519 115 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 ID1P41134 155 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 ZFP36L2P47974 494 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 SLC38A11Q08AI6 406 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 P2RY6Q15077 328 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 ZNF788Q6ZQV5 615 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 RXFP4Q8TDU9 374 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 DERL3Q96Q80 235 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 PRKNO60260 465 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 HIST1H1EP10412 219 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 YBX1P67809 324 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 FBXW9Q5XUX1 488 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 LRRTM1Q86UE6 522 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 MTFP1Q9UDX5 166 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 ZNF107Q9UII5 783 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 SH2D5Q6ZV89 423 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 MS4A7Q9GZW8 240 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 ING1Q9UK53 422 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 CTDSPLO15194 276 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 SFT2D2O95562 160 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 PTHLHP12272 177 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 KIR2DL1P43626 348 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 LSM11P83369 360 aaKnown RBP eCLIP6.5□□□□□ -1.37
SSR1-201ENST00000244763 EXOSC2Q13868 293 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 LIAT1Q6ZQX7 453 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 PDPNQ86YL7 162 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 FAM60AQ9NP50 221 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 PRNDQ9UKY0 176 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 PCDHGA9Q9Y5G4 932 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 TPPP2P59282 170 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 HLXQ14774 488 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 Q3ZCU0 254 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 PMS2CLQ68D20 193 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 FAM219AQ8IW50 185 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 FLYWCH2Q96CP2 140 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 SF3B6Q9Y3B4 125 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 MARF1Q9Y4F3 1742 aaKnown RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 PRF1P14222 555 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 CPN1P15169 458 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 COMPP49747 757 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 PMP22Q01453 160 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 FAHD2BQ6P2I3 314 aaPredicted RBP6.5□□□□□ -1.37
SSR1-201ENST00000244763 MAMSTRQ6ZN01 415 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 TGIF2LYQ8IUE0 185 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 TGIF2LXQ8IUE1 241 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 TMEM123Q8N131 208 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 FAHD2AQ96GK7 314 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 ZDHHC11Q9H8X9 412 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 KLK11Q9UBX7 282 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 FZR1Q9UM11 496 aa6.5□□□□□ -1.37
SSR1-201ENST00000244763 LIPT2A6NK58 231 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 SHISA8B8ZZ34 492 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 F5H697 171 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 GAB4Q2WGN9 574 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 RBPMS2Q6ZRY4 209 aaKnown RBP6.49□□□□□ -1.37
SSR1-201ENST00000244763 MAGT1Q9H0U3 335 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 MANBALQ9NQG1 85 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 IGHA1P01876 353 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 IGHA2P01877 340 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 MBPP02686 304 aaPredicted RBP6.49□□□□□ -1.37
SSR1-201ENST00000244763 DCTDP32321 178 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 MAGEA5P43359 124 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 ZNF658BQ4V348 819 aaPredicted RBP6.49□□□□□ -1.37
SSR1-201ENST00000244763 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
SSR1-201ENST00000244763 ATAD5Q96QE3 1844 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 RGPD3A6NKT7 1758 aaPredicted RBP6.49□□□□□ -1.37
SSR1-201ENST00000244763 TEX50A0A1B0GTY4 177 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 TNXAQ16473 311 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 DCAF10Q5QP82 559 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 MRGPREQ86SM8 312 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 VSTM2LQ96N03 204 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 WDR13Q9H1Z4 485 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 SEC16AO15027 2179 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 PPIAL4EA0A075B759 164 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 PPIAL4DF5H284 164 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 PPIAL4FP0DN26 164 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 NQO2P16083 231 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 IL24Q13007 206 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 MRM1Q6IN84 353 aaKnown RBP6.49□□□□□ -1.37
SSR1-201ENST00000244763 SRRQ9GZT4 340 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 SLC7A10Q9NS82 523 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 PPIAL4AQ9Y536 164 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 OR2W5A6NFC9 320 aa6.49□□□□□ -1.37
SSR1-201ENST00000244763 TCAPO15273 167 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms