RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TNFSF13O75888 250 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 CFDP00746 253 aaPredicted RBP15.82■□□□□ 0.12
HOXC11-201ENST00000243082 OR5H8P0DN80 308 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 CA6P23280 308 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 GMFBP60983 142 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 PPP1CBP62140 327 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 CLEC18BQ6UXF7 455 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 SNIP1Q8TAD8 396 aaKnown RBP15.82■□□□□ 0.12
HOXC11-201ENST00000243082 DECR2Q9NUI1 292 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 OR5B21A6NL26 309 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 TRAPPC2LH3BP13 241 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 CGAP01215 116 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 RPS2P15880 293 aaKnown RBP15.82■□□□□ 0.12
HOXC11-201ENST00000243082 CBR1P16152 277 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 SPINK2P20155 84 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 ERVS71-1P61550 626 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 GNG3P63215 75 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 TMEM211Q6ICI0 200 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 HAGHLQ6PII5 290 aaPredicted RBP15.82■□□□□ 0.12
HOXC11-201ENST00000243082 DHRS11Q6UWP2 260 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 C1orf162Q8NEQ5 155 aaPredicted RBP15.82■□□□□ 0.12
HOXC11-201ENST00000243082 MARS2Q96GW9 593 aaKnown RBP15.82■□□□□ 0.12
HOXC11-201ENST00000243082 CCDC120Q96HB5 630 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 OR2J1Q9GZK6 312 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF442Q9H7R0 627 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 IL36RNQ9UBH0 155 aa15.82■□□□□ 0.12
HOXC11-201ENST00000243082 MGAQ8IWI9 3026 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 C4BPBP20851 252 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF573Q86YE8 665 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 STARD4Q96DR4 205 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 PDCD10Q9BUL8 212 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 C1QTNF6Q9BXI9 259 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 C12orf4Q9NQ89 552 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 NECAP2Q9NVZ3 263 aa15.81■□□□□ 0.12
HOXC11-201ENST00000243082 MBD3L4A6NDZ8 208 aaPredicted RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 MBD3L3A6NE82 208 aaPredicted RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 MBD3L5A6NJ08 208 aaPredicted RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 PRSS44E7EML9 344 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 IGKV3-15P01624 115 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 S100A11P31949 105 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 EIF2S3P41091 472 aaKnown RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 FGL1Q08830 312 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 EXOSC2Q13868 293 aaKnown RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 SLC9A3R2Q15599 337 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 IGFBP7Q16270 282 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 TMUB2Q71RG4 321 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF610Q8N9Z0 462 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 MBD3L2Q8NHZ7 208 aaPredicted RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 OR51I2Q9H344 312 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 LHX6Q9UPM6 363 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 PTPRZ1P23471 2315 aaPredicted RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 A0A0B4J2A0 478 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 FAM25EA8MYX2 175 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 AGFG2O95081 481 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 PGAM2P15259 253 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 ECI1P42126 302 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 UCP2P55851 309 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 SLC22A25Q6T423 547 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 RCC2Q9P258 522 aaKnown RBP15.8■□□□□ 0.12
HOXC11-201ENST00000243082 SHPKQ9UHJ6 478 aa15.8■□□□□ 0.12
HOXC11-201ENST00000243082 RPA2P15927 270 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 IL24Q13007 206 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 IKZF1Q13422 519 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 ANKRD55Q3KP44 614 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 PLEKHN1Q494U1 663 aaPredicted RBP15.79■□□□□ 0.12
HOXC11-201ENST00000243082 CXorf67Q86X51 503 aaPredicted RBP15.79■□□□□ 0.12
HOXC11-201ENST00000243082 SLC25A40Q8TBP6 338 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 PPP1R1CQ8WVI7 109 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 EXTL1Q92935 676 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF488Q96MN9 340 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 OPN3Q9H1Y3 402 aaPredicted RBP15.79■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF286AQ9HBT8 521 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 PRR13Q9NZ81 148 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 GTF3C1Q12789 2109 aa15.79■□□□□ 0.12
HOXC11-201ENST00000243082 WDR1O75083 606 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF205O95201 554 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 IFNA7P01567 189 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 CALCRP30988 508 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 SERPINF1P36955 418 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 MPV17LQ2QL34 196 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 ALKBH6Q3KRA9 238 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 TMEM65Q6PI78 240 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 PKIBQ9C010 78 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 TMEM165Q9HC07 324 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 ZNF71Q9NQZ8 489 aaPredicted RBP15.78■□□□□ 0.12
HOXC11-201ENST00000243082 PROCRQ9UNN8 238 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 C14orf166Q9Y224 244 aaKnown RBP15.78■□□□□ 0.12
HOXC11-201ENST00000243082 TPD52L2O43399 206 aaKnown RBP15.78■□□□□ 0.12
HOXC11-201ENST00000243082 KNG1P01042 644 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 CTSDP07339 412 aaPredicted RBP15.78■□□□□ 0.12
HOXC11-201ENST00000243082 SLC25A4P12235 298 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 RAC2P15153 192 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 HOXC12P31275 282 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 PTGER4P35408 488 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 C11orf87Q6NUJ2 197 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 OR8H3Q8N146 312 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 OR1J1Q8NGS3 322 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 MFFQ9GZY8 342 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 ARL6Q9H0F7 186 aa15.78■□□□□ 0.12
HOXC11-201ENST00000243082 DSPP15924 2871 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms