RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 A0A1W2PR77 199 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 RNF222A6NCQ9 220 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 SMIM10L1P0DMW3 83 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 HRH1P35367 487 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 SNCAP37840 140 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 RPL29P47914 159 aaKnown RBP9.72□□□□□ -0.85
COPA-201ENST00000241704 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
COPA-201ENST00000241704 KHDC1LQ5JSQ8 128 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 TMEM182Q6ZP80 229 aaPredicted RBP9.72□□□□□ -0.85
COPA-201ENST00000241704 RND1Q92730 232 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 SMIM10Q96HG1 83 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 DDA1Q9BW61 102 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 KCNE5Q9UJ90 142 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 ICAM5Q9UMF0 924 aa9.72□□□□□ -0.85
COPA-201ENST00000241704 TDRD6O60522 2096 aaKnown RBP9.72□□□□□ -0.85
COPA-201ENST00000241704 SPTBN1Q01082 2364 aaKnown RBP9.72□□□□□ -0.85
COPA-201ENST00000241704 CST2P09228 141 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 SULT1A2P50226 295 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 EFNB1P98172 346 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 MFGE8Q08431 387 aaPredicted RBP9.71□□□□□ -0.85
COPA-201ENST00000241704 SAP25Q8TEE9 199 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 TSPAN32Q96QS1 320 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 CABLES2Q9BTV7 478 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 HYAL3O43820 417 aaPredicted RBP9.71□□□□□ -0.85
COPA-201ENST00000241704 ADAP1O75689 374 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 CD1AP06126 327 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 ZNF136P52737 540 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 RAC1P63000 192 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 CSRP2Q16527 193 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 ZNF429Q86V71 674 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 C2orf88Q9BSF0 95 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 ADAM19Q9H013 955 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 GPR173Q9NS66 373 aa9.71□□□□□ -0.85
COPA-201ENST00000241704 WDR81Q562E7 1941 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 ZNF724A8MTY0 619 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 DEGS1O15121 323 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 HAGHQ16775 308 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 PNLIPRP3Q17RR3 467 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 SLC23A3Q6PIS1 610 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 ETV3LQ6ZN32 361 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 BATF2Q8N1L9 274 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 OR56B2PQ8NGI1 322 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 OR10D3Q8NH80 312 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 FLVCR1Q9Y5Y0 555 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 A0A1W2PPE3 182 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 PLPP3O14495 311 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 XRCC2O43543 280 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 IFI6P09912 130 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 LPAR6P43657 344 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 ZNF83P51522 516 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 RAB32Q13637 225 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 RAB35Q15286 201 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 HIPK2Q9H2X6 1198 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 WDR54Q9H977 334 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 TMEM74BQ9NUR3 256 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 CACFD1Q9UGQ2 172 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 PITPNC1Q9UKF7 332 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 GREB1Q4ZG55 1949 aa9.71□□□□□ -0.86
COPA-201ENST00000241704 AKAP6Q13023 2319 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 OR6C6A6NF89 314 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 C4orf51C9J302 202 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 PPP5D1E7EU14 171 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 TLE4Q04727 773 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 AADACL3Q5VUY0 350 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 ADAMTS17Q8TE56 1095 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 GPX8Q8TED1 209 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 PLEKHA3Q9HB20 300 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.7□□□□□ -0.861e-6■■■□□ 19.1
COPA-201ENST00000241704 ZDHHC8Q9ULC8 765 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 ZMIZ1Q9ULJ6 1067 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 GLRA1P23415 457 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 ID4P47928 161 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 ZNF133P52736 654 aaPredicted RBP9.7□□□□□ -0.86
COPA-201ENST00000241704 TMPRSS3P57727 454 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 MSMO1Q15800 293 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 SPNS3Q6ZMD2 512 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 DGAT2L6Q6ZPD8 337 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 C9orf40Q8IXQ3 194 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 OR4A4PQ8NGN8 299 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 TMEM272A0A1B0GTI8 110 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 LNP1A1A4G5 178 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 CEBPZOSA8MTT3 80 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 IGLV3-19P01714 112 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 ZNF266Q14584 549 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 PYY3Q5JQD4 70 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 DEGS2Q6QHC5 323 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 TMEM108Q6UXF1 575 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 SMIM15Q7Z3B0 74 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 DMBX1Q8NFW5 382 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 OR8U1Q8NH10 309 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 ZNF721Q8TF20 911 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 LRP12Q9Y561 859 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 GBF1Q92538 1859 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 RNF212BA8MTL3 300 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 LSRQ86X29 649 aaPredicted RBP9.7□□□□□ -0.86
COPA-201ENST00000241704 OR2G3Q8NGZ4 309 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 VPS25Q9BRG1 176 aa9.7□□□□□ -0.86
COPA-201ENST00000241704 OPN3Q9H1Y3 402 aaPredicted RBP9.7□□□□□ -0.86
COPA-201ENST00000241704 BARX1Q9HBU1 254 aaPredicted RBP9.7□□□□□ -0.86
COPA-201ENST00000241704 CYC1P08574 325 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms