RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SLC35G3Q8N808 338 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 SLAMF9Q96A28 289 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 NTNG2Q96CW9 530 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 C10orf35Q96D05 121 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 ZNF799Q96GE5 643 aa13.48□□□□□ -0.25
DDX55-201ENST00000238146 WDR77Q9BQA1 342 aaPredicted RBP13.48□□□□□ -0.25
DDX55-201ENST00000238146 IGKV1-27A0A075B6S5 117 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 NOVA1P51513 510 aaKnown RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 RND3P61587 244 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 ZNF343Q6P1L6 599 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 FBXO46Q6PJ61 603 aaPredicted RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 OR2C3Q8N628 320 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 ZFP62Q8NB50 900 aaPredicted RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 SNIP1Q8TAD8 396 aaKnown RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 NABP1Q96AH0 204 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 SGK3Q96BR1 496 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 PFDN5Q99471 154 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 SYT3Q9BQG1 590 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 NKX2-4Q9H2Z4 354 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 C11orf1Q9H5F2 150 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 TMED3Q9Y3Q3 217 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 IGHV1OR15-9A0A0B4J2B8 117 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 FAM230AA0A1W2PPH8 454 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 HSD17B6O14756 317 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 CXCL1P09341 107 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 TAGLN2P37802 199 aaKnown RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 HIST1H3AP68431 136 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 ELOBQ15370 118 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 HIST2H3PS2Q5TEC6 136 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 Q8WTZ3 238 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 JSRP1Q96MG2 331 aaPredicted RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 TP53RKQ96S44 253 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 DUX1O43812 170 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 OR2J2O76002 312 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 MYF5P13349 255 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 CD27P26842 260 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 HNRNPKP61978 463 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX55-201ENST00000238146 C10orf128Q5T292 105 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 MEX3BQ6ZN04 569 aaKnown RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 MOB3AQ96BX8 217 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 UNKLQ9H9P5 680 aaKnown RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 GAR1Q9NY12 217 aaKnown RBP13.47□□□□□ -0.25
DDX55-201ENST00000238146 SEMA5BQ9P283 1151 aa13.47□□□□□ -0.25
DDX55-201ENST00000238146 IGSF23A1L1A6 192 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 ZNF724A8MTY0 619 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 H0YL77 283 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 GEMIN2O14893 280 aaKnown RBP13.46□□□□□ -0.25
DDX55-201ENST00000238146 CEBPGP53567 150 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 ZNF266Q14584 549 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 OR10AD1Q8NGE0 317 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 OR2AE1Q8NHA4 323 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 SPSB1Q96BD6 273 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 PLEK2Q9NYT0 353 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 MYOTQ9UBF9 498 aa13.46□□□□□ -0.25
DDX55-201ENST00000238146 IGLV3-12A0A075B6K2 115 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 A0A087WWC5 75 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 S100A2P29034 98 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 UBE2KP61086 200 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 ZNF674Q2M3X9 581 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 PIGYQ3MUY2 71 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 OR5L2Q8NGL0 311 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 OR14L1PQ8NHC6 308 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 TMEM171Q8WVE6 324 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 PARPBPQ9NWS1 579 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 KIAA1456Q9P272 454 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 LIPGQ9Y5X9 500 aa13.46□□□□□ -0.26
DDX55-201ENST00000238146 NKX2-6A6NCS4 301 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 PNLIPP16233 465 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 OMGP23515 440 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 UCP3P55916 312 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 PRSS12P56730 875 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 ERVFRD-1P60508 538 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 DLK1P80370 383 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 SP5Q6BEB4 398 aaPredicted RBP13.45□□□□□ -0.26
DDX55-201ENST00000238146 RHBDD2Q6NTF9 364 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 FOXL2NBQ6ZUU3 175 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 CPEB2Q7Z5Q1 589 aaKnown RBP13.45□□□□□ -0.26
DDX55-201ENST00000238146 ZNF610Q8N9Z0 462 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 ZNF383Q8NA42 475 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 OR8G5Q8NG78 346 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 ZNF385AQ96PM9 386 aaKnown RBP13.45□□□□□ -0.26
DDX55-201ENST00000238146 URGCP-MRPS24S4R325 110 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 NR2C1P13056 603 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 GPX4P36969 197 aaPredicted RBP13.45□□□□□ -0.26
DDX55-201ENST00000238146 SHBQ15464 509 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 SPNS3Q6ZMD2 512 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 Q6ZPA2 131 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 SUMF1Q8NBK3 374 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 CCDC54Q8NEL0 328 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 TMEM54Q969K7 222 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 RBM24Q9BX46 236 aaKnown RBP13.45□□□□□ -0.26
DDX55-201ENST00000238146 ZNF700Q9H0M5 742 aa13.45□□□□□ -0.26
DDX55-201ENST00000238146 SPAG17Q6Q759 2223 aa13.44□□□□□ -0.26
DDX55-201ENST00000238146 BTBD17A6NE02 478 aa13.44□□□□□ -0.26
DDX55-201ENST00000238146 TERTO14746 1132 aaKnown RBP13.44□□□□□ -0.26
DDX55-201ENST00000238146 HIST1H2BKO60814 126 aa13.44□□□□□ -0.26
DDX55-201ENST00000238146 PITX3O75364 302 aa13.44□□□□□ -0.26
DDX55-201ENST00000238146 ONECUT2O95948 504 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms