RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GLS2Q9UI32 602 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 KCNIP3Q9Y2W7 256 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 ZNF318Q5VUA4 2279 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 KCNAB3O43448 404 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 HOXD4P09016 255 aaPredicted RBP13.93□□□□□ -0.18
UBE3D-201ENST00000237186 ZNF728P0DKX0 622 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 PRDX4Q13162 271 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 CEACAM21Q3KPI0 293 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 C9orf135Q5VTT2 229 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 UNQ6126/PRO20091Q6UXV3 157 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 NUFIP2Q7Z417 695 aaKnown RBP13.93□□□□□ -0.18
UBE3D-201ENST00000237186 LRTM2Q8N967 370 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 MARS2Q96GW9 593 aaKnown RBP13.93□□□□□ -0.18
UBE3D-201ENST00000237186 GP6Q9HCN6 339 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 TMEM100Q9NV29 134 aa13.93□□□□□ -0.18
UBE3D-201ENST00000237186 MSGN1A6NI15 193 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 LGALS8O00214 317 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 NPBWR2P48146 333 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 PIGPP57054 158 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 MRPL21Q7Z2W9 205 aaKnown RBP13.92□□□□□ -0.18
UBE3D-201ENST00000237186 MCEMP1Q8IX19 187 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 IL22RA1Q8N6P7 574 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 BHLHE23Q8NDY6 225 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 HPSE2Q8WWQ2 592 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 CNTNAP3BQ96NU0 1288 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 PAPOLGQ9BWT3 736 aaKnown RBP13.92□□□□□ -0.18
UBE3D-201ENST00000237186 CNTNAP3Q9BZ76 1288 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 FGF23Q9GZV9 251 aaPredicted RBP13.92□□□□□ -0.18
UBE3D-201ENST00000237186 NAA60Q9H7X0 242 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 PARD6AQ9NPB6 346 aa13.92□□□□□ -0.18
UBE3D-201ENST00000237186 CCNOP22674 350 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 FGF12P61328 243 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 PLP2Q04941 152 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 TRIP6Q15654 476 aaKnown RBP13.91□□□□□ -0.18
UBE3D-201ENST00000237186 IAH1Q2TAA2 248 aaPredicted RBP13.91□□□□□ -0.18
UBE3D-201ENST00000237186 BRICD5Q6PL45 260 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 SLC22A25Q6T423 547 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 Q6ZPA2 131 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 ZDHHC23Q8IYP9 409 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 STPG2Q8N412 459 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 OR5A2Q8NGI9 324 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 DYRK2Q92630 601 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 MOB3AQ96BX8 217 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 SLC5A7Q9GZV3 580 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 PIGMQ9H3S5 423 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 STARD10Q9Y365 291 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 KNTC1P50748 2209 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 FREM2Q5SZK8 3169 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 PRR33A8MZF0 331 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 TAAR5O14804 337 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 IFNA21P01568 189 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 CD79AP11912 226 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 CCL2P13500 99 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 FCGR2CP31995 323 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 TMEM187Q14656 261 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 GGNBP1Q5YKI7 109 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 WDYHV1Q96HA8 205 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 SUCNR1Q9BXA5 334 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 ZNF442Q9H7R0 627 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 GSKIPQ9P0R6 139 aa13.91□□□□□ -0.18
UBE3D-201ENST00000237186 RCC2Q9P258 522 aaKnown RBP13.91□□□□□ -0.18
UBE3D-201ENST00000237186 RAB19A4D1S5 217 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 OR7C1O76099 320 aaPredicted RBP13.9□□□□□ -0.18
UBE3D-201ENST00000237186 CD82P27701 267 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 UQCC3Q6UW78 93 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.9□□□□□ -0.18
UBE3D-201ENST00000237186 GLRX5Q86SX6 157 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 PIP4P1Q86T03 277 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 SLC38A6Q8IZM9 456 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 RTN4IP1Q8WWV3 396 aaPredicted RBP13.9□□□□□ -0.18
UBE3D-201ENST00000237186 MARC2Q969Z3 335 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 SYT3Q9BQG1 590 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 ZDHHC11Q9H8X9 412 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 TAS2R3Q9NYW6 316 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 LIPGQ9Y5X9 500 aa13.9□□□□□ -0.18
UBE3D-201ENST00000237186 FAM221AA4D161 298 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 TEX46H3BTG2 121 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 IL18BPO95998 194 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 NGFP01138 241 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 HAAOP46952 286 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 ABCA11PQ4W5N1 156 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 MKXQ8IYA7 352 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 RNF141Q8WVD5 230 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 BCL2L2Q92843 193 aaPredicted RBP13.89□□□□□ -0.19
UBE3D-201ENST00000237186 MICU1Q9BPX6 476 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 RSRP1Q9BUV0 290 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 CRIM1Q9NZV1 1036 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 SPEF1Q9Y4P9 236 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 CD300LBA8K4G0 201 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 DEDDO75618 318 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 NAPSAO96009 420 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 FAM157CP0CG43 387 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 HKR1P10072 659 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 BCL3P20749 454 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 GLP1RP43220 463 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 GPM6AP51674 278 aa13.89□□□□□ -0.19
UBE3D-201ENST00000237186 EIF5AP63241 154 aaKnown RBP13.89□□□□□ -0.19
UBE3D-201ENST00000237186 PDCD1Q15116 288 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms