RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GNPNAT1Q96EK6 184 aaPredicted RBP11.38□□□□□ -0.59
MSH2-201ENST00000233146 FAM71F1Q96KD3 344 aaPredicted RBP11.38□□□□□ -0.59
MSH2-201ENST00000233146 MACROD1Q9BQ69 325 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 DOCK9Q9BZ29 2069 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 TMEM14DPA8MWL7 114 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 ST8SIA3O43173 380 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 ERI3O43414 337 aaKnown RBP11.38□□□□□ -0.59
MSH2-201ENST00000233146 RAD51DO75771 328 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 MPLP40238 635 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 CSNK1G2P78368 415 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 ABHD17CQ6PCB6 329 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 TXN2Q99757 166 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 HSPB9Q9BQS6 159 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 KLF16Q9BXK1 252 aaPredicted RBP11.38□□□□□ -0.59
MSH2-201ENST00000233146 VN1R1Q9GZP7 353 aa11.38□□□□□ -0.59
MSH2-201ENST00000233146 AQP7P3A6NL99 342 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 TIAF1O95411 115 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 CDS2O95674 445 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 ESDP10768 282 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 EMP2P54851 167 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 MRPS6P82932 125 aaKnown RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 NSDHLQ15738 373 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 ZIC1Q15915 447 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 SMIM21Q3B7S5 101 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 SPATA45Q537H7 98 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 SAXO1Q8IYX7 474 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 TMEM171Q8WVE6 324 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 HHLA2Q9UM44 414 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 OR5B21A6NL26 309 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 ZFP92A6NM28 416 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 H7C1C5 153 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 LMX1BO60663 402 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 PDGFBP01127 241 aaPredicted RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 H2BFMP0C1H6 154 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 HIST1H1DP16402 221 aaKnown RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 SRP14P37108 136 aaKnown RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 HINT1P49773 126 aaPredicted RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 LCN6P62502 163 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 TMEM41BQ5BJD5 291 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 PRAMEF20Q5VT98 475 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 C1orf140Q5VVS0 124 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 S100A7AQ86SG5 101 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 C1orf174Q8IYL3 243 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 LRRC75AQ8NAA5 344 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 C11orf1Q9H5F2 150 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 MRPL27Q9P0M9 148 aaKnown RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 PXMP4Q9Y6I8 212 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 KIAA1549LQ6ZVL6 1849 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 RNF212BA8MTL3 300 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 METTL12A8MUP2 240 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 SOX1O00570 391 aaPredicted RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 PSG1P11464 419 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 RPL23P62829 140 aaKnown RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 VAMP3Q15836 100 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 PRR27Q6MZM9 219 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 OR2C3Q8N628 320 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 Q8N976 141 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 OR52M1Q8NGK5 317 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 SGCZQ96LD1 299 aa11.37□□□□□ -0.59
MSH2-201ENST00000233146 MRPS16Q9Y3D3 137 aaKnown RBP11.37□□□□□ -0.59
MSH2-201ENST00000233146 C17orf102A2RUQ5 167 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 K7EQS6 105 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 RAB28P51157 221 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 RIPPLY3P57055 190 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 TAS2R46P59540 309 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 HYAL1Q12794 435 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 SQSTM1Q13501 440 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 SHBQ15464 509 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 SNAI3Q3KNW1 292 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 ITPRIPL2Q3MIP1 535 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 COX15Q7KZN9 410 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 CALHM1Q8IU99 346 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 TMEM234Q8WY98 164 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 PINX1Q96BK5 328 aaKnown RBP11.36□□□□□ -0.59
MSH2-201ENST00000233146 OR51I2Q9H344 312 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.36□□□□□ -0.59
MSH2-201ENST00000233146 LRP12Q9Y561 859 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 TRAPPC1Q9Y5R8 145 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 IGSF23A1L1A6 192 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 FAM24AA6NFZ4 105 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 MSTNO14793 375 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 SOCS1O15524 211 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 CTSDP07339 412 aaPredicted RBP11.36□□□□□ -0.59
MSH2-201ENST00000233146 EMDP50402 254 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 TMEM50BP56557 158 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 LINC00310P59036 64 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 POLR2LP62875 67 aaKnown RBP11.36□□□□□ -0.59
MSH2-201ENST00000233146 LCN2P80188 198 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 ID2Q02363 134 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 ROM1Q03395 351 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 VGLL4Q14135 290 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 SULF2Q8IWU5 870 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 ZNF665Q9H7R5 613 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 TP53TG3Q9ULZ0 132 aa11.36□□□□□ -0.59
MSH2-201ENST00000233146 A0A1W2PPV9 198 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 OR6C6A6NF89 314 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 ZNF814B7Z6K7 855 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 CTXN1P60606 82 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms