RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 PRKACAP17612 351 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 RRAS2P62070 204 aaPredicted RBP20.21■□□□□ 0.83
RRP9-201ENST00000232888 DAZAP2Q15038 168 aaPredicted RBP20.21■□□□□ 0.83
RRP9-201ENST00000232888 OR5H2Q8NGV7 314 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 GIMAP1Q8WWP7 306 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 RNASE6Q93091 150 aaKnown RBP20.21■□□□□ 0.83
RRP9-201ENST00000232888 ST6GALNAC5Q9BVH7 336 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 ALX4Q9H161 411 aaPredicted RBP20.21■□□□□ 0.83
RRP9-201ENST00000232888 DUSP13Q9UII6 198 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 POLEQ07864 2286 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 CHD8Q9HCK8 2581 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 RHBDL1O75783 438 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 CD200P41217 278 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 MICBQ29980 383 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 ATAD3CQ5T2N8 411 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 POC1AQ8NBT0 407 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 GTF3AQ92664 365 aaKnown RBP20.21■□□□□ 0.83
RRP9-201ENST00000232888 OR51J1Q9H342 316 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 GPN1Q9HCN4 374 aaPredicted RBP20.21■□□□□ 0.83
RRP9-201ENST00000232888 POU2F3Q9UKI9 436 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 FLVCR2Q9UPI3 526 aa20.21■□□□□ 0.83
RRP9-201ENST00000232888 SPTA1P02549 2419 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 PLSCR5A0PG75 271 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 DPRXA6NFQ7 191 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 CDIPTO14735 213 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 GRPP07492 148 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 SRSF7Q16629 238 aaKnown RBP eCLIP20.2■□□□□ 0.82
RRP9-201ENST00000232888 FIP1L1Q6UN15 594 aaKnown RBP20.2■□□□□ 0.82
RRP9-201ENST00000232888 TMEM17Q86X19 198 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 OR5AP2Q8NGF4 316 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 WFIKKN1Q96NZ8 548 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 ZNF442Q9H7R0 627 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 MYOZ1Q9NP98 299 aaPredicted RBP20.2■□□□□ 0.82
RRP9-201ENST00000232888 C12orf4Q9NQ89 552 aa20.2■□□□□ 0.82
RRP9-201ENST00000232888 F5H5P2 479 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 PYCARD-AS1I3L0S3 204 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 PTBP3O95758 552 aaKnown RBP20.19■□□□□ 0.82
RRP9-201ENST00000232888 OR3A3P47888 321 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 MAB21L1Q13394 359 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 IKZF1Q13422 519 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 MSMPQ1L6U9 139 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 CHRFAM7AQ494W8 412 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 SPIN3Q5JUX0 258 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 GLDNQ6ZMI3 551 aaPredicted RBP20.19■□□□□ 0.82
RRP9-201ENST00000232888 OR6F1Q8NGZ6 308 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 CCDC107Q8WV48 283 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 MRPL24Q96A35 216 aaKnown RBP20.19■□□□□ 0.82
RRP9-201ENST00000232888 RIMS4Q9H426 269 aaPredicted RBP20.19■□□□□ 0.82
RRP9-201ENST00000232888 MSL2Q9HCI7 577 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 ZNF701Q9NV72 531 aaPredicted RBP20.19■□□□□ 0.82
RRP9-201ENST00000232888 ZNF581Q9P0T4 197 aa20.19■□□□□ 0.82
RRP9-201ENST00000232888 POM121CA8CG34 1229 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 SNRPGP15A8MWD9 76 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 VSTM5A8MXK1 200 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 MCRIP1C9JLW8 97 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 PMP2P02689 132 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 FCGR3AP08637 254 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 RBM39Q14498 530 aaKnown RBP20.18■□□□□ 0.82
RRP9-201ENST00000232888 GRK1Q15835 563 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 NKPD1Q17RQ9 610 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 CD276Q5ZPR3 534 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 ZDHHC22Q8N966 263 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 ZNF488Q96MN9 340 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 HS3ST6Q96QI5 342 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 MED28Q9H204 178 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 HES4Q9HCC6 221 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 NDRG3Q9UGV2 375 aa20.18■□□□□ 0.82
RRP9-201ENST00000232888 ADORA2A-AS1P86434 159 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 SORDQ00796 357 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 ZNF146Q15072 292 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 SCGB2B2Q4G0G5 96 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 LRP11Q86VZ4 500 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 C11orf53Q8IXP5 236 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 ESRP2Q9H6T0 727 aaKnown RBP20.17■□□□□ 0.82
RRP9-201ENST00000232888 ERRFI1Q9UJM3 462 aaPredicted RBP20.17■□□□□ 0.82
RRP9-201ENST00000232888 HEATR1Q9H583 2144 aaKnown RBP20.17■□□□□ 0.82
RRP9-201ENST00000232888 PRR14LQ5THK1 2151 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 ABCD4O14678 606 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 NXPH2O95156 264 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 RLN1P04808 185 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 BSPH1Q075Z2 132 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 VHLLQ6RSH7 139 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 Q6ZS49 121 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 BATF2Q8N1L9 274 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 PIAS4Q8N2W9 510 aaPredicted RBP20.17■□□□□ 0.82
RRP9-201ENST00000232888 OR2Z1Q8NG97 314 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 OR13C8Q8NGS7 320 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 TERB2Q8NHR7 220 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 CA10Q9NS85 328 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 ZNF230Q9UIE0 474 aaPredicted RBP20.17■□□□□ 0.82
RRP9-201ENST00000232888 ANXA10Q9UJ72 324 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 ZNF221Q9UK13 617 aa20.17■□□□□ 0.82
RRP9-201ENST00000232888 TMEM82A0PJX8 343 aa20.16■□□□□ 0.82
RRP9-201ENST00000232888 UBE2QL1A1L167 161 aa20.16■□□□□ 0.82
RRP9-201ENST00000232888 BOLA2-SMG1P6H3BVE0 249 aa20.16■□□□□ 0.82
RRP9-201ENST00000232888 CSN2P05814 226 aa20.16■□□□□ 0.82
RRP9-201ENST00000232888 CFHR2P36980 270 aa20.16■□□□□ 0.82
RRP9-201ENST00000232888 PDCD1Q15116 288 aa20.16■□□□□ 0.82
RRP9-201ENST00000232888 CDK10Q15131 360 aa20.16■□□□□ 0.82
RRP9-201ENST00000232888 SLC22A25Q6T423 547 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms