RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ODAMA1E959 279 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 FCN3O75636 299 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 USF1P22415 310 aaPredicted RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 NPBWR2P48146 333 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 DAP3P51398 398 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 POLR2HP52434 150 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 EBPQ15125 230 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 MLF2Q15773 248 aaPredicted RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 B3GNTL1Q67FW5 361 aaPredicted RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 HIST2H2BCQ6DN03 193 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 HIST2H2BDQ6DRA6 164 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 ZNF808Q8N4W9 903 aaPredicted RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 OR2A1Q8NGT9 310 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 TMEM255BQ8WV15 326 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 MS4A6EQ96DS6 147 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 ARHGAP9Q9BRR9 750 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 GCM1Q9NP62 436 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 DLL4Q9NR61 685 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 MED29Q9NX70 200 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 CARHSP1Q9Y2V2 147 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 SELENOKQ9Y6D0 94 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 IGSF23A1L1A6 192 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 ZC3H12DA2A288 527 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 H7C417 338 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 PDX1P52945 283 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 C1orf194Q5T5A4 169 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 FAM71F2Q6NXP2 309 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 OR8G5Q8NG78 346 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 OR2Y1Q8NGV0 311 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 HAVCR2Q8TDQ0 301 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 BAALCQ8WXS3 180 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 TSLPQ969D9 159 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 ZNF488Q96MN9 340 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 ACTR3CQ9C0K3 210 aaPredicted RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 PHPT1Q9NRX4 125 aaPredicted RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 AURKAIP1Q9NWT8 199 aaPredicted RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 SF3B6Q9Y3B4 125 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 SNRNP200O75643 2136 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 KIAA1671Q9BY89 1806 aa7.33□□□□□ -1.24
SPARC-201ENST00000231061 TCF20Q9UGU0 1960 aaKnown RBP7.33□□□□□ -1.24
SPARC-201ENST00000231061 TMEM269A0A1B0GVZ9 245 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 LYRM1O43325 122 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 GKN3PP0CG01 181 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 NTF3P20783 257 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 SLC25A30Q5SVS4 291 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 GLT8D1Q68CQ7 371 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 TMEM64Q6YI46 380 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 OR4N5Q8IXE1 308 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 OR1S2Q8NGQ3 325 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 M1APQ8TC57 530 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 ACKR4Q9NPB9 350 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 ELOVL5Q9NYP7 299 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 ICAM5Q9UMF0 924 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 TCF19Q9Y242 345 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 V9GYY9 64 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 TRDV1A0A1B0GX56 115 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 A0A1W2PP55 124 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 A6NIN4 97 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 ZNF878C9JN71 531 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 CTBP2P56545 445 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 RNASE12Q5GAN4 147 aaKnown RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 UTF1Q5T230 341 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 FAM78BQ5VT40 261 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 SLC48A1Q6P1K1 146 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 OR2T33Q8NG76 320 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 DCUN1D4Q92564 292 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 C6orf106Q9H6K1 298 aaPredicted RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 B3GALT1Q9Y5Z6 326 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 TRAV39A0A0B4J263 110 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 HMGB3O15347 200 aaKnown RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 MRPL3P09001 348 aaKnown RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 LINC00271P0C7V0 271 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 LYL1P12980 280 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 PRTN3P24158 256 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 ZBTB25P24278 435 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 MNX1P50219 401 aaPredicted RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 ZNF133P52736 654 aaPredicted RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 SRSF3P84103 164 aaKnown RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 IQCJQ1A5X6 159 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 FAM78AQ5JUQ0 283 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 DND1Q8IYX4 353 aaKnown RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 SYS1Q8N2H4 156 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 GPR146Q96CH1 333 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 NDFIP1Q9BT67 221 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 OR51J1Q9H342 316 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 FNDC4Q9H6D8 234 aaPredicted RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 HINT3Q9NQE9 182 aaKnown RBP7.32□□□□□ -1.24
SPARC-201ENST00000231061 NOTCH4Q99466 2003 aa7.32□□□□□ -1.24
SPARC-201ENST00000231061 MAP1LC3B2A6NCE7 125 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 MBD3L4A6NDZ8 208 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 MBD3L3A6NE82 208 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 MBD3L5A6NJ08 208 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 B4DGG1 531 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 SLC17A3O00476 420 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 TNFSF15O95150 251 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 BMP5P22003 454 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 NFYAP23511 347 aaPredicted RBP7.31□□□□□ -1.24
SPARC-201ENST00000231061 CMPK1P30085 196 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 GFRA1P56159 465 aa7.31□□□□□ -1.24
SPARC-201ENST00000231061 OR10K2Q6IF99 312 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms