RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Smpd5D6MZJ6 483 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Nat8f7E0CYR6 227 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Adap1E9PY16 374 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 1700080E11RikE9Q9G1 206 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ptger4P32240 513 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 SnrpnP63163 240 aaKnown RBP10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr140Q60878 302 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cmtm4Q8CJ61 208 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr97Q8VFE1 310 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ighv5-2A0A0A6YVX8 117 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm14412A2ARR7 526 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm13769A2ATW2 309 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Esp3J3QN49 87 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Spi1P17433 272 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mcpt8P43430 247 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Dok1P97465 482 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1340Q3KPC7 315 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1058Q7TR74 316 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cacfd1Q8BG21 171 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Znf8Q8BGV5 572 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ms4a6dQ99N07 247 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 1700086D15RikQ9D9E9 151 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr920E9Q413 310 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm21970F6XX07 295 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Nkpd1Q0VF94 599 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Spata6Q3U6K5 488 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Q3V0E1 1183 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fam72aQ8BFZ8 149 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Emc6Q9CQW0 110 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 2410141K09RikK7N769 464 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1053L7MU59 313 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 mt-Co3P00416 261 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lyz2P08905 148 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Icam2P35330 277 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm7534Q3UU21 679 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Smim7Q5RKS2 75 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pnpla3Q91WW7 413 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Art4Q9CRA0 300 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mmp24Q9R0S2 618 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rdh19G5E8H9 318 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ccl20O89093 97 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 H2-DMaP28078 261 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lrfn3Q8BLY3 626 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Sdhaf4Q8BTE0 104 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Adam33Q923W9 797 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pga5Q9D106 387 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 PtgesQ9JM51 153 aa10.85□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm10778A0A087WNP5 499 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Adrb1P34971 466 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cpeb3Q7TN99 716 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1437Q7TQR7 312 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r62Q8R2C0 300 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1279Q8VF38 313 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr341Q8VGK9 313 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mad2l1bpQ9DCX1 276 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Kif26bQ7TNC6 2112 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 TectbO08524 329 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tas2r41P59532 308 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Neil3Q8K203 606 aaKnown RBP10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1342Q8VFY3 315 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mrgprb5Q91ZB9 322 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ankrd22Q9D3J5 191 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr19Q9JHB2 309 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Timp4Q9JHB3 224 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fam170bE9PXT9 378 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Prr22F6TNE3 422 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Prdx6O08709 224 aaKnown RBP10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Sult2a1P52843 285 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Neurl2Q9D0S4 285 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm5157A0A087WRH8 301 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rhox2bA2A447 191 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm572B1ARY8 399 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pcsk6F6XJP7 959 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r20K7N778 303 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Socs1O35716 212 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Csf2rbP26955 896 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pitx2P97474 317 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 PkibQ04758 92 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Xkr7Q5GH64 580 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Uts2bQ765I1 113 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Btbd17Q9DB72 478 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mettl9Q9EPL4 318 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Kcne5Q9QZ26 143 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mast2Q60592 1734 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 1810010D01RikA0A1L1SR87 51 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm2663F6R7E8 247 aaKnown RBP10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr635K7N6B1 321 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 EdaO54693 391 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gas1Q01721 343 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fbxw18Q3TSA9 469 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gpatch2Q7TQC7 527 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 1810009J06RikQ9CPN7 247 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Enpp5Q9EQG7 477 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r142K7N6U0 305 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 P2ry2P35383 373 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 ArsaP50428 506 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fstl4Q5STE3 841 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fbxw20Q5U467 468 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 ChdhQ8BJ64 596 aa10.84□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tstd3Q9D0B5 157 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms