RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PXT1Q8NFP0 134 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 MRPS24Q96EL2 167 aaKnown RBP13.03□□□□□ -0.32
TRIM3-215ENST00000639856 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 RDH8Q9NYR8 311 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 IL36GQ9NZH8 169 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 SHPKQ9UHJ6 478 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 EDARQ9UNE0 448 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 ZNF175Q9Y473 711 aa13.03□□□□□ -0.32
TRIM3-215ENST00000639856 ATMQ13315 3056 aa13.02□□□□□ -0.32
TRIM3-215ENST00000639856 IGKV1-12A0A0C4DH73 117 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 RNF222A6NCQ9 220 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 EEF1E1-BLOC1S5C9J1V9 151 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 RRP8O43159 456 aaKnown RBP13.02□□□□□ -0.33
TRIM3-215ENST00000639856 IGKV1D-12P01611 117 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 SERPINF1P36955 418 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 PDZK1IP1Q13113 114 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 PLCXD3Q63HM9 321 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 ACOT7LQ6ZUV0 252 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 MOB3CQ70IA8 216 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 P4HA3Q7Z4N8 544 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 THAP6Q8TBB0 222 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 PIGCQ92535 297 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 WBP1Q96G27 269 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
TRIM3-215ENST00000639856 FAAP24Q9BTP7 215 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 NMES1Q9C002 83 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 MED9Q9NWA0 146 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 LUZP4Q9P127 313 aa13.02□□□□□ -0.33
TRIM3-215ENST00000639856 C13orf42A0A1B0GVH6 325 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 AQP7O14520 342 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 SHOXO15266 292 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 CRHP06850 196 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 CHATP28329 748 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 UBA52P62987 128 aaKnown RBP13.01□□□□□ -0.33
TRIM3-215ENST00000639856 CYCSP99999 105 aaKnown RBP13.01□□□□□ -0.33
TRIM3-215ENST00000639856 SLC9A3R2Q15599 337 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 RGS7BPQ6MZT1 257 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-215ENST00000639856 CHMP1AQ9HD42 196 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-215ENST00000639856 RAB18Q9NP72 206 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 AK3Q9UIJ7 227 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 KANTRA0A1W2PQU2 76 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 hCG_1807616A0A1W2PRN6 198 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 MSTNO14793 375 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 IL18BPO95998 194 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 RLN2P04090 185 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 COX5BP10606 129 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 GLRA1P23415 457 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 PSMB6P28072 239 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 ECI1P42126 302 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 OSR2Q8N2R0 312 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 VRK1Q99986 396 aaPredicted RBP13.01□□□□□ -0.33
TRIM3-215ENST00000639856 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 ANXA10Q9UJ72 324 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 WASF3Q9UPY6 502 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 GTF3C1Q12789 2109 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 PIEZO2Q9H5I5 2752 aa13.01□□□□□ -0.33
TRIM3-215ENST00000639856 CCL2P13500 99 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 RPS2P15880 293 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 DTYMKP23919 212 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 ARPC4P59998 168 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 ATXN7L3Q14CW9 347 aaPredicted RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 RBMXL3Q8N7X1 1067 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 RBPMSQ93062 196 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 GMPPAQ96IJ6 420 aaPredicted RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 CMSS1Q9BQ75 279 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 WDR13Q9H1Z4 485 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 POM121CA8CG34 1229 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 GEMIN2O14893 280 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 BCL2L11O43521 198 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 SFTPBP07988 381 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 CD79AP11912 226 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 ZNF250P15622 560 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 ANKRD55Q3KP44 614 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 PIGYQ3MUY2 71 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 FBXW9Q5XUX1 488 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 Q6ZS92 163 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 FBXL14Q8N1E6 418 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 OR10AD1Q8NGE0 317 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 OR51F2Q8NH61 342 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 CXorf58Q96LI9 332 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 SULT4A1Q9BR01 284 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 REPIN1Q9BWE0 567 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 REG4Q9BYZ8 158 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 PCDHB16Q9NRJ7 776 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 MBD2Q9UBB5 411 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 C14orf166Q9Y224 244 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 ST3GAL6Q9Y274 331 aa13□□□□□ -0.33
TRIM3-215ENST00000639856 DSPP15924 2871 aaKnown RBP13□□□□□ -0.33
TRIM3-215ENST00000639856 ZNF850A8MQ14 1090 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 SS18L1O75177 396 aaPredicted RBP12.99□□□□□ -0.33
TRIM3-215ENST00000639856 ADAP1O75689 374 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 CCNOP22674 350 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 EIF2S3P41091 472 aaKnown RBP12.99□□□□□ -0.33
TRIM3-215ENST00000639856 SPACA3Q8IXA5 215 aa12.99□□□□□ -0.33
TRIM3-215ENST00000639856 INO80EQ8NBZ0 244 aaPredicted RBP12.99□□□□□ -0.33
TRIM3-215ENST00000639856 NAXEQ8NCW5 288 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms