RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 FBXW12Q6X9E4 464 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 CYB561D1Q8N8Q1 229 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 ZNF441Q8N8Z8 693 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 RTN4IP1Q8WWV3 396 aaPredicted RBP17.89■□□□□ 0.45
PMS1-222ENST00000639501 DYRK2Q92630 601 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 TM2D1Q9BX74 207 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 VN1R1Q9GZP7 353 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 EFNA2O43921 213 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 CD63P08962 238 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 FCGR2AP12318 317 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 FAHP16930 419 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 CLRN1P58418 232 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 EWSR1Q01844 656 aaKnown RBP eCLIP17.89■□□□□ 0.45
PMS1-222ENST00000639501 FAM189A2Q15884 450 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 LANCL3Q6ZV70 420 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 OR11L1Q8NGX0 322 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 C18orf12Q96KH6 178 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 SMOC1Q9H4F8 434 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 PLEKHJ1Q9NW61 149 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 HSF4Q9ULV5 492 aa17.89■□□□□ 0.45
PMS1-222ENST00000639501 WDFY3Q8IZQ1 3526 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 ZNF587BE7ETH6 402 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 PGA4P0DJD7 388 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 PGA3P0DJD8 388 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 ATP6V0CP27449 155 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 FBXW4P57775 412 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 NOXO1Q8NFA2 376 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 TMEM234Q8WY98 164 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 LRRC61Q9BV99 259 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 B3GALT1Q9Y5Z6 326 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 SHANK1Q9Y566 2161 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 CCDC187A0A096LP49 1063 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 SPTY2D1-AS1A0A0U1RR47 76 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 IGHV4-34P06331 123 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 FABP4P15090 132 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 ECI1P42126 302 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 SLC38A9Q8NBW4 561 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 OR2G3Q8NGZ4 309 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 ZDHHC12Q96GR4 267 aa17.88■□□□□ 0.45
PMS1-222ENST00000639501 FER1L5A0AVI2 2057 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 CFAP54Q96N23 3096 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 IGHV3-20A0A0C4DH32 117 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 FAM24AA6NFZ4 105 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 PPP1R2P9O14990 202 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 DBHP09172 617 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 SMAD4Q13485 552 aaKnown RBP17.87■□□□□ 0.45
PMS1-222ENST00000639501 OR1N1Q8NGS0 311 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 THAP3Q8WTV1 239 aaPredicted RBP17.87■□□□□ 0.45
PMS1-222ENST00000639501 BOD1Q96IK1 185 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 FAAP24Q9BTP7 215 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 FBRSQ9HAH7 460 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 COPS7AQ9UBW8 275 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 ZNF814B7Z6K7 855 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 THEGLP0DJG4 465 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 ZNF728P0DKX0 622 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 DDTP30046 118 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 ALDH3B1P43353 468 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 THEM4Q5T1C6 240 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 REC114Q7Z4M0 266 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 ZNF429Q86V71 674 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 ABHD5Q8WTS1 349 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 TMEM171Q8WVE6 324 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 MSI2Q96DH6 328 aaKnown RBP17.87■□□□□ 0.45
PMS1-222ENST00000639501 TGIF2Q9GZN2 237 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 TMED3Q9Y3Q3 217 aa17.87■□□□□ 0.45
PMS1-222ENST00000639501 ZNF724A8MTY0 619 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 IL13RA2Q14627 380 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 ICAM4Q14773 271 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 LIAT1Q6ZQX7 453 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 SHISA6Q6ZSJ9 500 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 SLC16A14Q7RTX9 510 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 AK3Q9UIJ7 227 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 CD207Q9UJ71 328 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 A0A087WWC5 75 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 IGSF23A1L1A6 192 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 ANKUB1A6NFN9 424 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 ST8SIA3O43173 380 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 OMGP23515 440 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 NKX6-1P78426 367 aaPredicted RBP17.86■□□□□ 0.45
PMS1-222ENST00000639501 ABCA11PQ4W5N1 156 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 C20orf196Q8IYI0 205 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 FRZBQ92765 325 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 SLC2A9Q9NRM0 540 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 HS3ST3A1Q9Y663 406 aa17.86■□□□□ 0.45
PMS1-222ENST00000639501 OR5H15A6NDH6 313 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 OR5H1A6NKK0 313 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 ZNF850A8MQ14 1090 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 TRGC1P0CF51 173 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 DUSP1P28562 367 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 MYBPHQ13203 477 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 OR2T2Q6IF00 324 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 CPEB2Q7Z5Q1 589 aaKnown RBP17.85■□□□□ 0.45
PMS1-222ENST00000639501 D2HGDHQ8N465 521 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 ZNF700Q9H0M5 742 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 ALKBH4Q9NXW9 302 aa17.85■□□□□ 0.45
PMS1-222ENST00000639501 A0A087X0M5 115 aa17.84■□□□□ 0.45
PMS1-222ENST00000639501 A0A1B0GX30 115 aa17.84■□□□□ 0.45
PMS1-222ENST00000639501 A0A1W2PNV4 684 aa17.84■□□□□ 0.45
PMS1-222ENST00000639501 FAM221AA4D161 298 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms