RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 LRRTM2O43300 516 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ADAP1O75689 374 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 GABARAPO95166 117 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 IGHV2-5P01817 119 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 LIMS3P0CW19 117 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 LIMS4P0CW20 117 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 HIST1H1CP16403 213 aaKnown RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 ATP5IP56385 69 aaPredicted RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 RND3P61587 244 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 RUNX1Q01196 453 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 SRSF4Q08170 494 aaKnown RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 SNTB1Q13884 538 aaKnown RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 CTF1Q16619 201 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 CHRFAM7AQ494W8 412 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 RAET1LQ5VY80 246 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 GCNT2Q8N0V5 402 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 UBE2J2Q8N2K1 259 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 GCSAMQ8N6F7 178 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 AQP11Q8NBQ7 271 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 RNASE8Q8TDE3 154 aaKnown RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 RBPMSQ93062 196 aaKnown RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 MAL2Q969L2 176 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 FEVQ99581 238 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 TCEAL7Q9BRU2 100 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 UNC13CQ8NB66 2214 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 TEX13DA0A0J9YY54 714 aaPredicted RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 RGS9O75916 674 aaPredicted RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 SERPINB10P48595 397 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 UCP3P55916 312 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 AP3S2P59780 193 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 NHLH2Q02577 135 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 FGL1Q08830 312 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 OR8G1Q15617 311 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 TMEM176BQ3YBM2 270 aaPredicted RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 DMRTA1Q5VZB9 504 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 CD276Q5ZPR3 534 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 LPCAT3Q6P1A2 487 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 VWA1Q6PCB0 445 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 KDM8Q8N371 416 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 Q8N6K4 173 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ZNF383Q8NA42 475 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 STXBP6Q8NFX7 210 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 OR5AK3PQ8NH89 298 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ZNF563Q8TA94 476 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 RAB8BQ92930 207 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 LYZL4Q96KX0 146 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 PLA2G12AQ9BZM1 189 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 SSR3Q9UNL2 185 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 J3QT63 122 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ATF1P18846 271 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ACVR1BP36896 505 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 PDLIM4P50479 330 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 FOXF2Q12947 444 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 PRAMEF5Q5TYX0 476 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 PRAMEF6Q5VXH4 476 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ZNF788Q6ZQV5 615 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 SLC35F2Q8IXU6 374 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ZFP82Q8N141 532 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 FTMTQ8N4E7 242 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 C12orf45Q8N5I9 185 aaPredicted RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 S100ZQ8WXG8 99 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 ELMOD3Q96FG2 381 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 LINC00052Q96N35 136 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 SLITRK2Q9H156 845 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 OR10A2Q9H208 303 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 NOX3Q9HBY0 568 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 HINT3Q9NQE9 182 aaKnown RBP5.47□□□□□ -1.53
RTTN-215ENST00000639487 OAZ3Q9UMX2 235 aa5.47□□□□□ -1.53
RTTN-215ENST00000639487 LRRN3E7EW58 273 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 E9PI62 339 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.46□□□□□ -1.54
RTTN-215ENST00000639487 DNASE2O00115 360 aaPredicted RBP5.46□□□□□ -1.54
RTTN-215ENST00000639487 ZG16O60844 167 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 HTR1AP08908 422 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 IFNGR1P15260 489 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 DNASE1P24855 282 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 STOMP27105 288 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 PSMB6P28072 239 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 CLRN1P58418 232 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 C9orf62Q8N4C0 152 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 ABHD4Q8TB40 342 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 MRGPRDQ8TDS7 321 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 DPF1Q92782 380 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 TRMT61AQ96FX7 289 aaKnown RBP5.46□□□□□ -1.54
RTTN-215ENST00000639487 TNFRSF13CQ96RJ3 184 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 ATG101Q9BSB4 218 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 SIRPDQ9H106 197 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 HIPK2Q9H2X6 1198 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 TPRKBQ9Y3C4 175 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 CDH23Q9H251 3354 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 LOC100509620A0A075B734 347 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 ANKRD30BLA7E2S9 258 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 PTGES3LE9PB15 166 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 PRR23D1E9PI22 279 aaPredicted RBP5.46□□□□□ -1.54
RTTN-215ENST00000639487 TMEM178BH3BS89 294 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 EIF1AYO14602 144 aaKnown RBP5.46□□□□□ -1.54
RTTN-215ENST00000639487 ADAM20O43506 726 aa5.46□□□□□ -1.54
RTTN-215ENST00000639487 CSTBP04080 98 aaKnown RBP5.46□□□□□ -1.54
RTTN-215ENST00000639487 PRR23D2P0DMB1 279 aaPredicted RBP5.46□□□□□ -1.54
RTTN-215ENST00000639487 CTLA4P16410 223 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms