RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 HHIPQ96QV1 700 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 VAX2Q9UIW0 290 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 C21orf62-AS1Q17RA5 79 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 PBOV1Q9GZY1 135 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 JKAMPQ9P055 326 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 TOPAZ1Q8N9V7 1692 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 MPDU1O75352 247 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 CLDN10P78369 228 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 FBXL14Q8N1E6 418 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 OR1N1Q8NGS0 311 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 NBASA2RRP1 2371 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 PAPPA-AS1Q5QFB9 102 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 ELFN2Q5R3F8 820 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 PRRX2Q99811 253 aa17.41■□□□□ 0.38
CACNA1A-257ENST00000638009 CD3DP04234 171 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 INHBBP09529 407 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 FAM24BQ8N5W8 94 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 Q96M85 177 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 K7ESF4 209 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 CDX4O14627 284 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 AKR7A3O95154 331 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 MT-ND6P03923 174 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 CD68P34810 354 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 STAC2Q6ZMT1 411 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 OR1L6Q8NGR2 347 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 SLAMF8Q9P0V8 285 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 TBX21Q9UL17 535 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 RNPS1Q15287 305 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 M0R1B8 84 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 SLC35E3Q7Z769 313 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 DUSP18Q8NEJ0 188 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 LAT2Q9GZY6 243 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 NARFLQ9H6Q4 476 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 DIO1P49895 249 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 SLC25A26Q70HW3 274 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 MIOXQ9UGB7 285 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 CRYABP02511 175 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 T-ENOLP0DO92 83 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 ST6GAL1P15907 406 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 JAG1P78504 1218 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 BSXQ3C1V8 233 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 PRSS50Q9UI38 385 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 TARM1B6A8C7 271 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 HLA-DRB3P79483 266 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 RASL11BQ9BPW5 248 aa17.4■□□□□ 0.38
CACNA1A-257ENST00000638009 M0R082 166 aa17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 RER1O15258 196 aa17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 ALOX12BO75342 701 aa17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 ZNF121P58317 390 aaPredicted RBP17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 HYAL1Q12794 435 aa17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 OR4B1Q8NGF8 309 aa17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 SPAG8Q99932 426 aaPredicted RBP17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 CLEC5AQ9NY25 188 aa17.39■□□□□ 0.38
CACNA1A-257ENST00000638009 PRSS56P0CW18 603 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 PCSK6P29122 969 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 CCR2P41597 374 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 ZNF775Q96BV0 537 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 XKR7Q5GH72 579 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 IL17BQ9UHF5 180 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 SLC2A10O95528 541 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 ASCL5Q7RTU5 278 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 ZNF502Q8TBZ5 544 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 SLC46A2Q9BY10 475 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 KCNAB3O43448 404 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 CBR3O75828 277 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 DNLZQ5SXM8 178 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 OR10G4Q8NGN3 311 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 OR10G9Q8NGN4 311 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 OR10G7Q8NGN6 311 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 FUCA1P04066 466 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 GPX2P18283 190 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 IVDP26440 423 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 STPG2Q8N412 459 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 LYPD8Q6UX82 237 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 GMPPAQ96IJ6 420 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 LPAR5Q9H1C0 372 aa17.39■□□□□ 0.37
CACNA1A-257ENST00000638009 LINC00696Q6ZRV3 163 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 WDR13Q9H1Z4 485 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 C7orf72A4D263 438 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 CLDN2P57739 230 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 MYBPHQ13203 477 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 LEMD1Q68G75 181 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 Q7L0L9 218 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 VN1R17PQ8TDU5 208 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 M0QZQ0 153 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 SS18L1O75177 396 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 ERV3-1Q14264 604 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 SPACA9Q96E40 222 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 PARD6GQ9BYG4 376 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 PRKRAO75569 313 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 CCL11P51671 97 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 TIAL1Q01085 375 aaKnown RBP eCLIP17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 MVB12AQ96EY5 273 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 DIRC2Q96SL1 478 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 HOXA6P31267 233 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 SPANXN1Q5VSR9 72 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 ACER3Q9NUN7 267 aa17.38■□□□□ 0.37
CACNA1A-257ENST00000638009 PLXNB2O15031 1838 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms