RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 OR5AC1P0C628 307 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 LIFP15018 202 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 RSU1Q15404 277 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 KRTAP27-1Q3LI81 207 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 MIDNQ504T8 468 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 LHFPL2Q6ZUX7 228 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 PPP1R3BQ86XI6 285 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 GPR137CQ8N3F9 429 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 ZIC4Q8N9L1 334 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 SECTM1Q8WVN6 248 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 HPSE2Q8WWQ2 592 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 TAAR9Q96RI9 348 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
CLN6-215ENST00000636674 FAAP24Q9BTP7 215 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 RBM24Q9BX46 236 aaKnown RBP12.64□□□□□ -0.39
CLN6-215ENST00000636674 ZNF391Q9UJN7 358 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 IGKV1-27A0A075B6S5 117 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 LY6G6EA0A0G2JKS1 128 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 ZNF850A8MQ14 1090 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 MASP2O00187 686 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 SYNGR3O43761 229 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 SCGB1D2O95969 90 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 MT-ND4LP03901 98 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 GLAP06280 429 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 DUSP1P28562 367 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 PPT1P50897 306 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 TAF9Q16594 264 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 ABCA11PQ4W5N1 156 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 GUSBP11Q6P575 273 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 ZNF100Q8IYN0 542 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 MSI2Q96DH6 328 aaKnown RBP12.64□□□□□ -0.39
CLN6-215ENST00000636674 C14orf79Q96F83 325 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 CLCC1Q96S66 551 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 DUSP23Q9BVJ7 150 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
CLN6-215ENST00000636674 SLC2A9Q9NRM0 540 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 NXT1Q9UKK6 140 aaKnown RBP12.64□□□□□ -0.39
CLN6-215ENST00000636674 U3KQA8 63 aa12.64□□□□□ -0.39
CLN6-215ENST00000636674 A0A1B0GW64 132 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 C1orf196B1AJZ1 125 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 CST2P09228 141 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 RBP2P50120 134 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 OR8B8Q15620 311 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 GUK1Q16774 197 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 ZFP82Q8N141 532 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 LGI3Q8N145 548 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 TMEM156Q8N614 296 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 MED12Q93074 2177 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 MOB3AQ96BX8 217 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 REEP6Q96HR9 211 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 CCDC74BQ96LY2 380 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 PROK2Q9HC23 129 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 SH2D2AQ9NP31 389 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 ZDHHC8Q9ULC8 765 aa12.63□□□□□ -0.39
CLN6-215ENST00000636674 IGHV3-15A0A0B4J1V0 119 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 C5orf52A6NGY3 159 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 UBE2CO00762 179 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 SGCEO43556 437 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 ANGPTL7O43827 346 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 ZIC3O60481 467 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 S100A8P05109 93 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 SMIM6P0DI80 62 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 AGAP20933 346 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 EPHA8P29322 1005 aaPredicted RBP12.62□□□□□ -0.39
CLN6-215ENST00000636674 CCL7P80098 99 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 RAET1LQ5VY80 246 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 TOMM40LQ969M1 308 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 BSCL2Q96G97 398 aaPredicted RBP12.62□□□□□ -0.39
CLN6-215ENST00000636674 MARS2Q96GW9 593 aaKnown RBP12.62□□□□□ -0.39
CLN6-215ENST00000636674 SYT3Q9BQG1 590 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 SIT1Q9Y3P8 196 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 CACNA1HO95180 2353 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 OR6C6A6NF89 314 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 PRSS44E7EML9 344 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 SPRY1O43609 319 aaPredicted RBP12.62□□□□□ -0.39
CLN6-215ENST00000636674 EIF3GO75821 320 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLN6-215ENST00000636674 OPRM1P35372 400 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 RRADP55042 308 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 RAC1P63000 192 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 LYZL2Q7Z4W2 148 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 SPEM1Q8N4L4 309 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 CCDC71LQ8N9Z2 235 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 LFNGQ8NES3 379 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 OR10AD1Q8NGE0 317 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 BORCS8Q96FH0 119 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 POM121Q96HA1 1249 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 RSRP1Q9BUV0 290 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 ZNF286AQ9HBT8 521 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 RPS10P5Q9NQ39 176 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 C19orf12Q9NSK7 152 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 TMED3Q9Y3Q3 217 aa12.62□□□□□ -0.39
CLN6-215ENST00000636674 LAMA1P25391 3075 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 CACNA1EQ15878 2313 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 CCDC187A0A096LP49 1063 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 IGHV1-45A0A0A0MS14 117 aa12.61□□□□□ -0.39
CLN6-215ENST00000636674 ST8SIA3O43173 380 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms