RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 OR10J5Q8NHC4 309 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 SCGB1C1Q8TD33 95 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 AIFM2Q9BRQ8 373 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 RASL12Q9NYN1 266 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 KCNK7Q9Y2U2 307 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 AHRRA9YTQ3 701 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 FCGR2CP31995 323 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 HAAOP46952 286 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 RBPJQ06330 500 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 LAMTOR1Q6IAA8 161 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 IQCF2Q8IXL9 164 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR56B2PQ8NGI1 322 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR4A4PQ8NGN8 299 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 EDARADDQ8WWZ3 215 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 SPSB4Q96A44 273 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 NABP1Q96AH0 204 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 ADGRG7Q96K78 797 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 GUCD1Q96NT3 240 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 FBXO7Q9Y3I1 522 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 IGKV1D-43A0A0B4J1Z2 117 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 hCG_38984A0A1B0GV85 526 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CD300LBA8K4G0 201 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF732B4DXR9 585 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 HOXB5P09067 269 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 NKX2-1P43699 371 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CAMLGP49069 296 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 RPL19P84098 196 aaKnown RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CDCP2Q5VXM1 449 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR10S1Q8NGN2 331 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR2S2Q9NQN1 319 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CA10Q9NS85 328 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 LIN7CQ9NUP9 197 aaKnown RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 IGHV3-15A0A0B4J1V0 119 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 APOC3P02656 99 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PTHLHP12272 177 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PRKACAP17612 351 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 VDAC1P21796 283 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 FXYD4P59646 89 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 INPP5JQ15735 1006 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 IGFBP7Q16270 282 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM30BQ3MIR4 351 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TOR2AQ5JU69 321 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM42Q69YG0 159 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 Q6ZS49 121 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR52B4Q8NGK2 314 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR1S1Q8NH92 325 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 AQP10Q96PS8 301 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF629Q9UEG4 869 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OSGIN2Q9Y236 505 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PTPRSQ13332 1948 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR8U9P0C7N5 309 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CASP6P55212 293 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PIGPP57054 158 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 DEFA5Q01523 94 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR52W1Q6IF63 320 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 DHRS13Q6UX07 377 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 LIAT1Q6ZQX7 453 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TAF9BQ9HBM6 251 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TICRRQ7Z2Z1 1910 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 SDHBP21912 280 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 AKR1C2P52895 323 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 GFRA1P56159 465 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 RND3P61587 244 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TSPO2Q5TGU0 170 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 SLC30A7Q8NEW0 376 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 WNT2BQ93097 391 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PIPOXQ9P0Z9 390 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CACNA1CQ13936 2221 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TRIM77I1YAP6 450 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PHF1O43189 567 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 GALR2O43603 387 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF735P0CB33 412 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 ZP1P60852 638 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 QRFPP83859 136 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TLE4Q04727 773 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 GLRX5Q86SX6 157 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 FAM58AQ8N1B3 248 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR2I1PQ8NGU4 316 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CIB3Q96Q77 187 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 LSM5Q9Y4Y9 91 aaKnown RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 DOCK8Q8NF50 2099 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CHATP28329 748 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 IL24Q13007 206 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 FAM219AQ8IW50 185 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM104Q8NE00 496 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR11L1Q8NGX0 322 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 OR2AE1Q8NHA4 323 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 PNRC2Q9NPJ4 139 aaKnown RBP3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TRAPPC2LQ9UL33 140 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 CACNA1IQ9P0X4 2223 aa3.97□□□□□ -1.77
SCN1A-210ENST00000635776 TRBV6-7A0A0A0MS04 114 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 PCP4L1A6NKN8 68 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 A6NLC8 198 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 SPINT2O43291 252 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 SEC11BP0C7V7 166 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 IRF2P14316 349 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 IL2RGP31785 369 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 SMIM21Q3B7S5 101 aa3.96□□□□□ -1.77
SCN1A-210ENST00000635776 AKR1C8PQ5T2L2 129 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms