RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 FAM71E1Q6IPT2 247 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF793Q6ZN11 406 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 OR5H6Q8NGV6 325 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 TMED3Q9Y3Q3 217 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 MTCH2Q9Y6C9 303 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 PPP1R17O96001 155 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 FAM106CPP0CH98 169 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 SOX8P57073 446 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ZBTB37Q5TC79 503 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ETV3LQ6ZN32 361 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 PTRH1Q86Y79 214 aaKnown RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF683Q8IZ20 524 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF384Q8TF68 577 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 SMIM19Q96E16 107 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 SORT1Q99523 831 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF629Q9UEG4 869 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 RALGAPA1Q6GYQ0 2036 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 IGHV3OR16-12A0A075B7B8 117 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 FCN1O00602 326 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 ACTL6AO96019 429 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 FABP4P15090 132 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 PRSS12P56730 875 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 SLC38A11Q08AI6 406 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 SIGIRRQ6IA17 410 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 MAMSTRQ6ZN01 415 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 C16orf92Q96LL3 132 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 DOK1Q99704 481 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 PCGF1Q9BSM1 259 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 CLN8Q9UBY8 286 aa4.97□□□□□ -1.61
SCN1A-209ENST00000635750 POLR2AP24928 1970 aaKnown RBP4.97□□□□□ -1.61
SCN1A-209ENST00000635750 LAMA4Q16363 1823 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 A0A1W2PR48 441 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 DHRS7CA6NNS2 312 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 METTL12A8MUP2 240 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 PRSS2P07478 247 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 LPAR6P43657 344 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 ANKRD55Q3KP44 614 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 CMPK2Q5EBM0 449 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 FHL5Q5TD97 284 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 FAM109BQ6ICB4 259 aaPredicted RBP4.96□□□□□ -1.61
SCN1A-209ENST00000635750 LRP11Q86VZ4 500 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 D2HGDHQ8N465 521 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 MARCH1Q8TCQ1 289 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 PATE1Q8WXA2 126 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 P2RX4Q99571 388 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 DCTN5Q9BTE1 182 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 MANBALQ9NQG1 85 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 PIKFYVEQ9Y2I7 2098 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM129A0AVI4 362 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OR5B21A6NL26 309 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 TAPBPO15533 448 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OPN1MWP04001 364 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OR4E1P0C645 316 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OPN1MW2P0DN77 364 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OPN1MW3P0DN78 364 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 G6PCP35575 357 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 TOMM34Q15785 309 aaPredicted RBP4.96□□□□□ -1.61
SCN1A-209ENST00000635750 KHDC3LQ587J8 217 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF561Q8N587 486 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 STPG3Q8N7X2 389 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OR4P4Q8NGL7 312 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OR2G2Q8NGZ5 317 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 OR2A5Q96R48 311 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 WNT16Q9UBV4 365 aa4.96□□□□□ -1.61
SCN1A-209ENST00000635750 SHPRHQ149N8 1683 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ACAA1P09110 424 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ALDOCP09972 364 aaKnown RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 COL8A1P27658 744 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ERVFRD-1P60508 538 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 LGALSLQ3ZCW2 172 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ACER2Q5QJU3 275 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 MUC20Q8N307 709 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 NANOGP1Q8N7R0 232 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 MCHR2Q969V1 340 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 RAX2Q96IS3 184 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF665Q9H7R5 613 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 LPAR2Q9HBW0 351 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 C20orf141Q9NUB4 165 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 TECRQ9NZ01 308 aaKnown RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 HMGN4O00479 90 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF737O75373 536 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 MMP11P24347 488 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 FOXF1Q12946 379 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 FCN2Q15485 313 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 TWIST1Q15672 202 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 WDR25Q64LD2 544 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 KLHDC9Q8NEP7 349 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 LILRB4Q8NHJ6 448 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 SGMS2Q8NHU3 365 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 PRR14Q9BWN1 585 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 CHODLQ9H9P2 273 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 RALYQ9UKM9 306 aaKnown RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 CRYBG1Q9Y4K1 1723 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 A0A1W2PR80 420 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 H3BP45 60 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 TRIM77I1YAP6 450 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 FGF17O60258 216 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 CAMPP49913 170 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 GP2P55259 537 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms