RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ELL3Q9HB65 397 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
LINC00339-207ENST00000634712 NKX1-2Q9UD57 310 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 SOX21Q9Y651 276 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-207ENST00000634712 IGHV1-69DA0A0B4J2H0 117 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 A0A1W2PPH5 198 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 IGHV1-69P01742 117 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 CHRM2P08172 466 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 HCKP08631 526 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 GNAO1P09471 354 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 PRTN3P24158 256 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 CEBPDP49716 269 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-207ENST00000634712 ST3GAL4Q11206 333 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 OR2G6Q5TZ20 316 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 RUSC1-AS1Q66K80 236 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 PDZD9Q8IXQ8 264 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 ASCC1Q8N9N2 400 aaKnown RBP12.93□□□□□ -0.34
LINC00339-207ENST00000634712 TBC1D15Q8TC07 691 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 SLC25A28Q96A46 364 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 ZMAT3Q9HA38 289 aaKnown RBP12.93□□□□□ -0.34
LINC00339-207ENST00000634712 BABAM2Q9NXR7 383 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
LINC00339-207ENST00000634712 DNHD1Q96M86 4753 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 DNAJC9-AS1A6NH13 148 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 M0R1W7 72 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 MAGEB3O15480 346 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 SPRY1O43609 319 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-207ENST00000634712 MT-ND2P03891 347 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 CD2P06729 351 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 EEF1B2P24534 225 aaKnown RBP12.92□□□□□ -0.34
LINC00339-207ENST00000634712 RPL31P62899 125 aaKnown RBP12.92□□□□□ -0.34
LINC00339-207ENST00000634712 GUCA2AQ02747 115 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 COL10A1Q03692 680 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 PDZK1IP1Q13113 114 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 DEFB112Q30KQ8 113 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 C1orf122Q6ZSJ8 110 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 STX19Q8N4C7 294 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 BPIFB6Q8NFQ5 453 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 GPR148Q8TDV2 347 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 RFT1Q96AA3 541 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 FAM234AQ9H0X4 552 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 SIRT7Q9NRC8 400 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 CNOT2Q9NZN8 540 aaKnown RBP12.92□□□□□ -0.34
LINC00339-207ENST00000634712 CLEC2DQ9UHP7 191 aa12.92□□□□□ -0.34
LINC00339-207ENST00000634712 MDFIC2A0A1B0GVS7 189 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 F8VVB4 439 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 F8VWA3 439 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 H0YHG0 523 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 SULT1B1O43704 296 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 TK1P04183 234 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 PIPP12273 146 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-207ENST00000634712 BCL3P20749 454 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 SOX2P48431 317 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 CDK5R1Q15078 307 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 TUSC1Q2TAM9 212 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 FAM58AQ8N1B3 248 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 PARP16Q8N5Y8 322 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 OR4M1Q8NGD0 313 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 OR52N1Q8NH53 320 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 TFAP2CQ92754 450 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 CPNE2Q96FN4 548 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-207ENST00000634712 SPACA5Q96QH8 159 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
LINC00339-207ENST00000634712 NOX4Q9NPH5 578 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 FAM96BQ9Y3D0 163 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 PCDHGB5Q9Y5G0 923 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 STAB1Q9NY15 2570 aa12.91□□□□□ -0.34
LINC00339-207ENST00000634712 hCG_1809904A0A1W2PP81 198 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 A0A1W2PPE2 198 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 A0A1W2PR64 198 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 A0A1W2PRV1 198 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 XPNPEP2O43895 674 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 ALX3O95076 343 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 TMEM225BP0DP42 221 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 PRKACAP17612 351 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 RAB3AP20336 220 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 NPBWR2P48146 333 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 SLC9A3R2Q15599 337 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 NCR3LG1Q68D85 454 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 GDPD3Q7L5L3 318 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 Q8N7P7 452 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 ZSCAN4Q8NAM6 433 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-207ENST00000634712 OR5D18Q8NGL1 313 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 OR5D13Q8NGL4 314 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 C19orf12Q9NSK7 152 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 PLCXD1Q9NUJ7 323 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 RBFOX1Q9NWB1 397 aaKnown RBP12.9□□□□□ -0.34
LINC00339-207ENST00000634712 PSORS1C1Q9UIG5 152 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 ZNF281Q9Y2X9 895 aa12.9□□□□□ -0.34
LINC00339-207ENST00000634712 K7N7A8 449 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 MYL12BO14950 172 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 OGG1O15527 345 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 HOXA3O43365 443 aaPredicted RBP12.89□□□□□ -0.35
LINC00339-207ENST00000634712 ANGPTL7O43827 346 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 HAND1O96004 215 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 CALCBP10092 127 aa12.89□□□□□ -0.35
LINC00339-207ENST00000634712 SNU13P55769 128 aaKnown RBP12.89□□□□□ -0.35
LINC00339-207ENST00000634712 EDDM3BP56851 147 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms