RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 CABIN1Q9Y6J0 2220 aa13.33□□□□□ -0.28
PMS1-221ENST00000624204 DNLZQ5SXM8 178 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 SPSB3Q6PJ21 355 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 C1QL2Q7Z5L3 287 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 RHBDD1Q8TEB9 315 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 RTN4IP1Q8WWV3 396 aaPredicted RBP13.32□□□□□ -0.28
PMS1-221ENST00000624204 C1orf147Q96MC9 270 aaPredicted RBP13.32□□□□□ -0.28
PMS1-221ENST00000624204 CERS4Q9HA82 394 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 GPR84Q9NQS5 396 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 KIAA1456Q9P272 454 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 TMED7-TICAM2A0A0A6YYA0 188 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 A6NNC1 897 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 EWSR1Q01844 656 aaKnown RBP eCLIP13.32□□□□□ -0.28
PMS1-221ENST00000624204 POU3F1Q03052 451 aaPredicted RBP13.32□□□□□ -0.28
PMS1-221ENST00000624204 ICAM4Q14773 271 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 DNM1P34Q6PK57 102 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 OR5AS1Q8N127 324 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 OR14L1PQ8NHC6 308 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 SNIP1Q8TAD8 396 aaKnown RBP13.32□□□□□ -0.28
PMS1-221ENST00000624204 LIN37Q96GY3 246 aaPredicted RBP13.32□□□□□ -0.28
PMS1-221ENST00000624204 SNHG12Q9BXW3 62 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 TBL1XR1Q9BZK7 514 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 CRYM-AS1A6NIL9 109 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 SPINK2P20155 84 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 RNF133Q8WVZ7 376 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 PIGTQ969N2 578 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 ELSPBP1Q96BH3 223 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 NUDT16L1Q9BRJ7 211 aaKnown RBP13.32□□□□□ -0.28
PMS1-221ENST00000624204 SMDT1Q9H4I9 107 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 GNG13Q9P2W3 67 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 ANAPC10Q9UM13 185 aa13.32□□□□□ -0.28
PMS1-221ENST00000624204 ASXL3Q9C0F0 2248 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 CLDN34H7C241 214 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 PLPP3O14495 311 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 GUSBP08236 651 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 C11orf40Q8WZ69 217 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 CBY1Q9Y3M2 126 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 DVL1O14640 695 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 HMGB3O15347 200 aaKnown RBP13.31□□□□□ -0.28
PMS1-221ENST00000624204 DFFBO76075 338 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 FOLR1P15328 257 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 IL12BP29460 328 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 PLA2G5P39877 138 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 LBX1P52954 281 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 OR6X1Q8NH79 312 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 PLEKHJ1Q9NW61 149 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 FRYQ5TBA9 3013 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 KNTC1P50748 2209 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 COL4A6Q14031 1691 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 REV3LO60673 3130 aa13.31□□□□□ -0.28
PMS1-221ENST00000624204 MT-ATP6P00846 226 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 CTSDP07339 412 aaPredicted RBP13.3□□□□□ -0.28
PMS1-221ENST00000624204 DBHP09172 617 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 PRTGQ2VWP7 1150 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 GAB4Q2WGN9 574 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 COL13A1Q5TAT6 717 aaPredicted RBP13.3□□□□□ -0.28
PMS1-221ENST00000624204 CNKSR3Q6P9H4 555 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 TMEM183AQ8IXX5 376 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 SLC35G3Q8N808 338 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 SHDQ96IW2 340 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 PECRQ9BY49 303 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 A0A0J9YY10 115 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 SFTPDP35247 375 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 H3F3AP84243 136 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 ZNF266Q14584 549 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 WDFY1Q8IWB7 410 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 PPP1R14DQ9NXH3 145 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 MCTS1Q9ULC4 181 aaKnown RBP13.3□□□□□ -0.28
PMS1-221ENST00000624204 HSPA12AO43301 675 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 PNLIPP16233 465 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 DUSP1P28562 367 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 FGF8P55075 233 aaPredicted RBP13.3□□□□□ -0.28
PMS1-221ENST00000624204 MRPL41Q8IXM3 137 aaKnown RBP13.3□□□□□ -0.28
PMS1-221ENST00000624204 LRFN1Q9P244 771 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 THAP10Q9P2Z0 257 aaPredicted RBP13.3□□□□□ -0.28
PMS1-221ENST00000624204 FBLN5Q9UBX5 448 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 PIAS3Q9Y6X2 628 aa13.3□□□□□ -0.28
PMS1-221ENST00000624204 PCNX3Q9H6A9 2034 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 A0A1B0GW64 132 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 XKRY2A2RUG3 117 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 IL33O95760 270 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 HLA-HP01893 362 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 ZNF728P0DKX0 622 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 PGCP20142 388 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 LMO1P25800 156 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 SLC6A8P48029 635 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 FUT7Q11130 342 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 TAF9Q16594 264 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 SLC35E3Q7Z769 313 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 OR4X1Q8NH49 305 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 SOHLH2Q9NX45 425 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 PHF1O43189 567 aaPredicted RBP13.29□□□□□ -0.28
PMS1-221ENST00000624204 ANGPTL7O43827 346 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
PMS1-221ENST00000624204 ANOS1P23352 680 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 OR1D4P47884 311 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 RPL29P47914 159 aaKnown RBP13.29□□□□□ -0.28
PMS1-221ENST00000624204 ARMC6Q6NXE6 501 aa13.29□□□□□ -0.28
PMS1-221ENST00000624204 DEGS2Q6QHC5 323 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms