RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 DCUN1D4Q92564 292 aa10.96□□□□□ -0.66
LITAF-221ENST00000622633 SLC25A44Q96H78 314 aaPredicted RBP10.96□□□□□ -0.66
LITAF-221ENST00000622633 GNRHR2Q96P88 292 aa10.96□□□□□ -0.66
LITAF-221ENST00000622633 ZNF587Q96SQ5 575 aaPredicted RBP10.96□□□□□ -0.66
LITAF-221ENST00000622633 CKLFQ9UBR5 152 aa10.96□□□□□ -0.66
LITAF-221ENST00000622633 SRPK3Q9UPE1 567 aa10.96□□□□□ -0.66
LITAF-221ENST00000622633 EMC9Q9Y3B6 208 aa10.96□□□□□ -0.66
LITAF-221ENST00000622633 CSAG2Q9Y5P2 127 aa10.96□□□□□ -0.66
LITAF-221ENST00000622633 PCNX3Q9H6A9 2034 aa10.96□□□□□ -0.66
LITAF-221ENST00000622633 A8MVM7 634 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 SOX1O00570 391 aaPredicted RBP10.95□□□□□ -0.66
LITAF-221ENST00000622633 HPRT1P00492 218 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 UCP3P55916 312 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 FOXL2P58012 376 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 C1orf189Q5VU69 101 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 TMEM268Q5VZI3 342 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
LITAF-221ENST00000622633 CMTM1Q8IZ96 169 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 AGBL5Q8NDL9 886 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 FAM174AQ8TBP5 190 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 ORAOV1Q8WV07 137 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 WWTR1Q9GZV5 400 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 SLC17A5Q9NRA2 495 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 NOP16Q9Y3C1 178 aaKnown RBP10.95□□□□□ -0.66
LITAF-221ENST00000622633 SPEGQ15772 3267 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 TRBV6-7A0A0A0MS04 114 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 C2orf72A6NCS6 295 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 MSGN1A6NI15 193 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 LMX1BO60663 402 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 NPIPB7O75200 414 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 GOSR1O95249 250 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 NHLH1Q02575 133 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 C16orf47Q6ZP98 133 aaPredicted RBP10.95□□□□□ -0.66
LITAF-221ENST00000622633 GBGT1Q8N5D6 347 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 GPR119Q8TDV5 335 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 SLC41A2Q96JW4 573 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 CMKLR1Q99788 373 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 SLC7A11Q9UPY5 501 aa10.95□□□□□ -0.66
LITAF-221ENST00000622633 C2CD4DB7Z1M9 353 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 H3BMH7 237 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 AMY2AP04746 511 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 DCNP07585 359 aaKnown RBP10.94□□□□□ -0.66
LITAF-221ENST00000622633 MELTFP08582 738 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 IGFBP3P17936 291 aaPredicted RBP10.94□□□□□ -0.66
LITAF-221ENST00000622633 ALDH3B1P43353 468 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 DNASE1L1P49184 302 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 TAS2R19P59542 299 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 UBE2KP61086 200 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 RPL19P84098 196 aaKnown RBP10.94□□□□□ -0.66
LITAF-221ENST00000622633 LINC00346Q8IVM7 164 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR5D18Q8NGL1 313 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 CASTOR1Q8WTX7 329 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 CMBLQ96DG6 245 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 NELFAQ9H3P2 528 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 KCNJ16Q9NPI9 418 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 CLEC5AQ9NY25 188 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 IL19Q9UHD0 177 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 RP1P56715 2156 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 A0A1W2PQD3 144 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 CNOT4O95628 575 aaKnown RBP10.94□□□□□ -0.66
LITAF-221ENST00000622633 CSN2P05814 226 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR13C7P0DN81 318 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 ZNF28P17035 718 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 ARL4DP49703 201 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 UCP2P55851 309 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR1D5P58170 312 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 FMODQ06828 376 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 NR0B2Q15466 257 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 SHISA6Q6ZSJ9 500 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 LRP11Q86VZ4 500 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 C1orf87Q8N0U7 546 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 TMEM229BQ8NBD8 167 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR1P1Q8NH06 330 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR52N5Q8NH56 324 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR1L3Q8NH93 324 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR2V1Q8NHB1 315 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 OR14L1PQ8NHC6 308 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 MITD1Q8WV92 249 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 NKD1Q969G9 470 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 SLC35E1Q96K37 410 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 EIF5A2Q9GZV4 153 aaKnown RBP10.94□□□□□ -0.66
LITAF-221ENST00000622633 SLC35B3Q9H1N7 401 aa10.94□□□□□ -0.66
LITAF-221ENST00000622633 LOC101059948A0A1B0GTJ6 334 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 A6NIZ1 184 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 SERPINA2P20848 420 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 PSMB6P28072 239 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 HSD11B1P28845 292 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 PMPCAQ10713 525 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 SLC9A3R2Q15599 337 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 GRINAQ7Z429 371 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 LINC01551Q86U37 167 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 MRPL41Q8IXM3 137 aaKnown RBP10.93□□□□□ -0.66
LITAF-221ENST00000622633 DAZLQ92904 295 aaKnown RBP10.93□□□□□ -0.66
LITAF-221ENST00000622633 COPS7AQ9UBW8 275 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 HHLA2Q9UM44 414 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 R4GMQ9 66 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 FREM3P0C091 2139 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 LAMA1P25391 3075 aa10.93□□□□□ -0.66
LITAF-221ENST00000622633 A0A087WWC5 75 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms