RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 TLE4Q04727 773 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 EDDM3AQ14507 147 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 OR6S1Q8NH40 331 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 SUCNR1Q9BXA5 334 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 RASL12Q9NYN1 266 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 PDCD6O75340 191 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 ZBTB25P24278 435 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
MSH6-215ENST00000622629 HMGN3Q15651 99 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 MIDNQ504T8 468 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 MRPL24Q96A35 216 aaKnown RBP11.28□□□□□ -0.6
MSH6-215ENST00000622629 PLK3Q9H4B4 646 aa11.28□□□□□ -0.6
MSH6-215ENST00000622629 TMEM218A2RU14 115 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 NUDT19A8MXV4 375 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 LIFP15018 202 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 AADACP22760 399 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 TAGLN2P37802 199 aaKnown RBP11.27□□□□□ -0.6
MSH6-215ENST00000622629 ELLP55199 621 aaPredicted RBP11.27□□□□□ -0.6
MSH6-215ENST00000622629 DMWDQ09019 674 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 TESK1Q15569 626 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 PIGYQ3MUY2 71 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 NHLRC3Q5JS37 347 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.6
MSH6-215ENST00000622629 NIPSNAP3BQ9BS92 247 aa11.27□□□□□ -0.6
MSH6-215ENST00000622629 A0A1W2PR80 420 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 SFTA3P0C7M3 94 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 MSMO1Q15800 293 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 LCN15Q6UWW0 184 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 SLC36A1Q7Z2H8 476 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 DCAF16Q9NXF7 216 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 GDF9O60383 454 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 IAPPP10997 89 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 HBG1P69891 147 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 HBG2P69892 147 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 TBC1D28Q2M2D7 210 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 C1orf210Q8IVY1 113 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 TMEM123Q8N131 208 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 SPSB2Q99619 263 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 ADAT1Q9BUB4 502 aaKnown RBP11.27□□□□□ -0.61
MSH6-215ENST00000622629 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
MSH6-215ENST00000622629 A0A0U1RQK1 487 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 CTXN2P0C2S0 81 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 USF2Q15853 346 aaPredicted RBP11.26□□□□□ -0.61
MSH6-215ENST00000622629 FNDC7Q5VTL7 733 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 OR2T2Q6IF00 324 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 UQCC3Q6UW78 93 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.26□□□□□ -0.61
MSH6-215ENST00000622629 ZNF573Q86YE8 665 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 ARL6IP6Q8N6S5 226 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 TCEAL3Q969E4 200 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 PFDN5Q99471 154 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
MSH6-215ENST00000622629 HBE1P02100 147 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 RAB11AP62491 216 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 NKX6-1P78426 367 aaPredicted RBP11.26□□□□□ -0.61
MSH6-215ENST00000622629 TRA2AQ13595 282 aaKnown RBP eCLIP11.26□□□□□ -0.616e-7■■■■■ 32.2
MSH6-215ENST00000622629 OR1C1Q15619 314 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 PPP1R35Q8TAP8 253 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 AQP3Q92482 292 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 NMES1Q9C002 83 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 SHARPINQ9H0F6 387 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 NAA60Q9H7X0 242 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 MMP26Q9NRE1 261 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 RNF150Q9ULK6 438 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 POLEQ07864 2286 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 ESPL1Q14674 2120 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 RGS7BPQ6MZT1 257 aaPredicted RBP11.26□□□□□ -0.61
MSH6-215ENST00000622629 DHRS13Q6UX07 377 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 TMEM178AQ8NBL3 297 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 APOBEC3DQ96AK3 386 aaPredicted RBP11.26□□□□□ -0.61
MSH6-215ENST00000622629 PIK3IP1Q96FE7 263 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 TCFL5Q9UL49 500 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 M0R296 226 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 TNFSF15O95150 251 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 ERVK-16P61578 105 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 CATR1Q13166 79 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 SLC25A47Q6Q0C1 308 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 THNSL2Q86YJ6 484 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 ESRP2Q9H6T0 727 aaKnown RBP11.26□□□□□ -0.61
MSH6-215ENST00000622629 GNG13Q9P2W3 67 aa11.26□□□□□ -0.61
MSH6-215ENST00000622629 DENND4CQ5VZ89 1909 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 FAM24AA6NFZ4 105 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 IGLV3-19P01714 112 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 GLAP06280 429 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 ARR3P36575 388 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 MECP2P51608 486 aaKnown RBP11.25□□□□□ -0.61
MSH6-215ENST00000622629 PRDX4Q13162 271 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 UNC119Q13432 240 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 OR8U1Q8NH10 309 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 WNT2BQ93097 391 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 NUDT16L1Q9BRJ7 211 aaKnown RBP11.25□□□□□ -0.61
MSH6-215ENST00000622629 OR5AC2Q9NZP5 309 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
MSH6-215ENST00000622629 C3AR1Q16581 482 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 GUK1Q16774 197 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms