RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CSF3P09919 207 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 GTF2F2P13984 249 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 RAB40AQ8WXH6 277 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 SELENOIQ9C0D9 397 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 RBFOX1Q9NWB1 397 aaKnown RBP15.06■□□□□ 0
PTCHD3-202ENST00000622555 EXTL2Q9UBQ6 330 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 F8VVB4 439 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 F8VWA3 439 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 AKR7A2O43488 359 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 PGA5P0DJD9 388 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 TALDO1P37837 337 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 GMFBP60983 142 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 MADCAM1Q13477 382 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 ASAH1Q13510 395 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 CDH24Q86UP0 819 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 DTX3Q8N9I9 347 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 OR4M1Q8NGD0 313 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 LRRC29Q8WV35 223 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 S100A16Q96FQ6 103 aaKnown RBP15.05■□□□□ -0
PTCHD3-202ENST00000622555 PSMG3-AS1Q96PY0 264 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 URM1Q9BTM9 101 aaKnown RBP15.05■□□□□ -0
PTCHD3-202ENST00000622555 CACNG6Q9BXT2 260 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 GCM1Q9NP62 436 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 PPP1R3CQ9UQK1 317 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 AKAP6Q13023 2319 aa15.05■□□□□ -0
PTCHD3-202ENST00000622555 A0A1W2PQ09 198 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 METTL21EPA6NDL7 271 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 PMELP40967 661 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 RPS27AP62979 156 aaKnown RBP15.04■□□□□ -0
PTCHD3-202ENST00000622555 ELP2Q6IA86 826 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 CCBE1Q6UXH8 406 aaPredicted RBP15.04■□□□□ -0
PTCHD3-202ENST00000622555 BIVMQ86UB2 503 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 Q8IYB0 196 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 OSR2Q8N2R0 312 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 POC1AQ8NBT0 407 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 OR51T1Q8NGJ9 327 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 ERGIC1Q969X5 290 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 PHF21AQ96BD5 680 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 NRIP2Q9BQI9 281 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 PLEKHF2Q9H8W4 249 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 LRBAP50851 2863 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 TANC2Q9HCD6 1990 aa15.04■□□□□ -0
PTCHD3-202ENST00000622555 C3orf80F5H4A9 247 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 NXPH2O95156 264 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 HNRNPCP07910 306 aaKnown RBP eCLIP15.03■□□□□ -0
PTCHD3-202ENST00000622555 RBMXP38159 391 aaKnown RBP15.03■□□□□ -0
PTCHD3-202ENST00000622555 RFX2P48378 723 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 SCN1BQ07699 218 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 ZNF295-AS1Q8N0V1 137 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 FAM58AQ8N1B3 248 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 OR11L1Q8NGX0 322 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 CHAC2Q8WUX2 184 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 EMG1Q92979 244 aaKnown RBP15.03■□□□□ -0
PTCHD3-202ENST00000622555 MRPS24Q96EL2 167 aaKnown RBP15.03■□□□□ -0
PTCHD3-202ENST00000622555 NICN1Q9BSH3 213 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 RAB1BQ9H0U4 201 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 LPAR5Q9H1C0 372 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 RHOFQ9HBH0 211 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 TREM2Q9NZC2 230 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 NOS1APO75052 506 aaPredicted RBP15.03■□□□□ -0
PTCHD3-202ENST00000622555 ACAA1P09110 424 aaPredicted RBP15.03■□□□□ -0
PTCHD3-202ENST00000622555 PRKACAP17612 351 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 CDK2P24941 298 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 SNU13P55769 128 aaKnown RBP15.03■□□□□ -0
PTCHD3-202ENST00000622555 FGF12P61328 243 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 ERVK11-1P61568 191 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 FAM189A2Q15884 450 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 PIGYQ3MUY2 71 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 PYDC2Q56P42 97 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 C20orf204Q6ZNR8 217 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 IZUMO1Q8IYV9 350 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 Q8NFD4 153 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 OR10Z1Q8NGY1 313 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 Q8TCH9 128 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 Q96M66 194 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 DIABLOQ9NR28 239 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 ST3GAL6Q9Y274 331 aa15.03■□□□□ -0
PTCHD3-202ENST00000622555 GCN1Q92616 2671 aaKnown RBP15.02■□□□□ -0
PTCHD3-202ENST00000622555 HPXP02790 462 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 CPT2P23786 658 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 CFHR2P36980 270 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 PITPNBP48739 271 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 VEGFCP49767 419 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 RBM11P57052 281 aaKnown RBP15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 BOLLQ8N9W6 283 aaKnown RBP15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 TM2D1Q9BX74 207 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 RNF7Q9UBF6 113 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 IL36RNQ9UBH0 155 aa15.02□□□□□ -0.01
PTCHD3-202ENST00000622555 A0A0A6YYD4 124 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 WNT9BO14905 357 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 PLA2G10O15496 165 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 SSX4O60224 188 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 IRF2P14316 349 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 GLRA1P23415 457 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 GABRR1P24046 479 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 HOXA4Q00056 320 aaPredicted RBP15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 IL18Q14116 193 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 MOGAT2Q3SYC2 334 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 TMEM69Q5SWH9 247 aa15.01□□□□□ -0.01
PTCHD3-202ENST00000622555 TGIF2LYQ8IUE0 185 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms