RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 GSK3AP49840 483 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 MLF1P58340 268 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 ZNF816Q0VGE8 651 aaPredicted RBP7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 TMEM104Q8NE00 496 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 GPX7Q96SL4 187 aaPredicted RBP7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 MS4A7Q9GZW8 240 aaPredicted RBP7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 POFUT1Q9H488 388 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 UBTD1Q9HAC8 227 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 RPS10P5Q9NQ39 176 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 TINAGQ9UJW2 476 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 MED6O75586 246 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 MGMTP16455 207 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 S100PP25815 95 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 MST1P26927 711 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 KIR3DL2P43630 455 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 RPS23P62266 143 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 GK2Q14410 553 aaPredicted RBP7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 HIKESHIQ53FT3 197 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 WDR5BQ86VZ2 330 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 ADGRG3Q86Y34 549 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 ZBTB44Q8NCP5 570 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 OTOSQ8NHW6 89 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 FAM131CQ96AQ9 280 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 S1PR5Q9H228 398 aa7.31□□□□□ -1.24
PTPDC1-204ENST00000620992 TRBV5-5A0A0J9YX44 114 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 A0A1W2PPH5 198 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SLC22A23A1A5C7 686 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SH2D1BO14796 132 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 IFNA1P01562 189 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 PPP3CBP16298 524 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 LTBRP36941 435 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 GPR12P47775 334 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 ASCL1P50553 236 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 EGR3Q06889 387 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 PRSS42Q7Z5A4 293 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 ZDHHC23Q8IYP9 409 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 RTN4RQ9BZR6 473 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 ZNF275Q9NSD4 429 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SSUH2Q9Y2M2 353 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 LRP12Q9Y561 859 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 FLVCR1Q9Y5Y0 555 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 OR6C76A6NM76 312 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 ONECUT2O95948 504 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 PNPP00491 289 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 CCL8P80075 99 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 TUSC1Q2TAM9 212 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SPINK9Q5DT21 86 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 NHLRC3Q5JS37 347 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 H2BFWTQ7Z2G1 175 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SLC35G3Q8N808 338 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 OR52H1Q8NGJ2 320 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 RNF166Q96A37 237 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 RAB22AQ9UL26 194 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 POLDIP2Q9Y2S7 368 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 EML5Q05BV3 1969 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 HNF1AP20823 631 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 ARR3P36575 388 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 FAM74A1Q5RGS3 127 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 STUMQ69YW2 141 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 FAM219AQ8IW50 185 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 GABRG1Q8N1C3 465 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 MARCH1Q8TCQ1 289 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 MARVELD3Q96A59 401 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 MSI2Q96DH6 328 aaKnown RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 BOD1Q96IK1 185 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 DUSP15Q9H1R2 295 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 CHODLQ9H9P2 273 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SPTBN5Q9NRC6 3674 aaKnown RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 TMEM272A0A1B0GTI8 110 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 ZFP92A6NM28 416 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 H0Y8G0 127 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 CLN5O75503 358 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 IGF2P01344 180 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 NMBP08949 121 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 OR5H8P0DN80 308 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 HLA-DOBP13765 273 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SRP14P37108 136 aaKnown RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 MFGE8Q08431 387 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 TRA2AQ13595 282 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 HABP2Q14520 560 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 C1orf87Q8N0U7 546 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 LRRC75AQ8NAA5 344 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SLC30A7Q8NEW0 376 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 OR1F12Q8NHA8 337 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 SCARB1Q8WTV0 552 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 MCHR2Q969V1 340 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 TVP23CQ96ET8 276 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 BSCL2Q96G97 398 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 OR8B4Q96RC9 309 aa7.3□□□□□ -1.24
PTPDC1-204ENST00000620992 ANKUB1A6NFN9 424 aa7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 GPR137BO60478 399 aa7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 SLC37A1P57057 533 aa7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 TAS2R31P59538 309 aa7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 EMC4Q5J8M3 183 aa7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 TIPARPQ7Z3E1 657 aaKnown RBP7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 PTPMT1Q8WUK0 201 aaPredicted RBP7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 SEH1LQ96EE3 360 aa7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 ADAT1Q9BUB4 502 aaKnown RBP7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 CLDN16Q9Y5I7 305 aa7.29□□□□□ -1.24
PTPDC1-204ENST00000620992 AUP1Q9Y679 476 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms