RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HSF4Q9ULV5 492 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 LIPGQ9Y5X9 500 aa9.12□□□□□ -0.95
VPS11-207ENST00000620429 IGHV2OR16-5A0A0B4J2B6 119 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 J3QW42 95 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 WDR1O75083 606 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 PFN1P07737 140 aaKnown RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 LTBRP36941 435 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ENDOGQ14249 297 aaKnown RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 EXOSC7Q15024 291 aaKnown RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 MMDQ15546 238 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 TRIM61Q5EBN2 209 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 VN1R4Q7Z5H5 301 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 TRAPPC6BQ86SZ2 158 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 RCBTB1Q8NDN9 531 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 RASD2Q96D21 266 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 SH3BGRL3Q9H299 93 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 CST9LQ9H4G1 147 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 WFDC1Q9HC57 220 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 LYRM2Q9NU23 88 aaPredicted RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 FUT9Q9Y231 359 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ST3GAL6Q9Y274 331 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 RBM7Q9Y580 266 aaKnown RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 ENTPD2Q9Y5L3 495 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ALPK2Q86TB3 2170 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 DOCK8Q8NF50 2099 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 F5P12259 2224 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 A0A1B0GV50 99 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 FITM1A5D6W6 292 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 TMEM212A6NML5 194 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 CTSVO60911 334 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 LDB3O75112 727 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 EPHA8P29322 1005 aaPredicted RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 ZFP36L1Q07352 338 aaKnown RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 HYAL1Q12794 435 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 GPR18Q14330 331 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ZNF260Q3ZCT1 412 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ACTL10Q5JWF8 245 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 TPTE2P1Q5T6R2 138 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ZNF880Q6PDB4 577 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ADGRE4PQ86SQ3 457 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 CDRT4Q8N9R6 151 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 DTWD2Q8NBA8 298 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 FGGYQ96C11 551 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 HIPK2Q9H2X6 1198 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 PLK3Q9H4B4 646 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ZMAT3Q9HA38 289 aaKnown RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 RNF24Q9Y225 148 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 EML5Q05BV3 1969 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 A0A1B0GTH9 108 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ANKUB1A6NFN9 424 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 ABHD16AO95870 558 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 EMDP50402 254 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 DLX2Q07687 328 aaPredicted RBP9.11□□□□□ -0.95
VPS11-207ENST00000620429 PCK2Q16822 640 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 VWA1Q6PCB0 445 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 DPY19L2P2Q6ZN68 376 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 SGPP2Q8IWX5 399 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 SMRP1Q8NCR6 262 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 WFDC12Q8WWY7 111 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 TMEM56Q96MV1 263 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 VAMP8Q9BV40 100 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 NUDT9Q9BW91 350 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 RXFP3Q9NSD7 469 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 TMEM74BQ9NUR3 256 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 SLC45A2Q9UMX9 530 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 TMEM56-RWDD3S4R434 201 aa9.11□□□□□ -0.95
VPS11-207ENST00000620429 BDP1A6H8Y1 2624 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 FIGNL2A6NMB9 653 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 K7EQS6 105 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 KLF8O95600 359 aaPredicted RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 UBE2NP61088 152 aaKnown RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 GNB2P62879 340 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 ZXDAP98168 799 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 FHL5Q5TD97 284 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 TOMM20LQ6UXN7 152 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 TMEM182Q6ZP80 229 aaPredicted RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 ZNF550Q7Z398 422 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 TMEFF1Q8IYR6 380 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 GVQW1Q8N7I0 195 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 OR10AC1Q8NH08 325 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 OR14C36Q8NHC7 312 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 SCGB3A2Q96PL1 93 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 LPAR4Q99677 370 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 ALG12Q9BV10 488 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 PHF7Q9BWX1 381 aaPredicted RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 MKKSQ9NPJ1 570 aaPredicted RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 TMEM106BQ9NUM4 274 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 OBP2AQ9NY56 170 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 MRM2Q9UI43 246 aaKnown RBP9.1□□□□□ -0.95
VPS11-207ENST00000620429 A0A1W2PQU0 124 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 SLC31A1O15431 190 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 CT45A8P0DMV1 189 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 CT45A9P0DMV2 189 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 BMP5P22003 454 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 CLDN18P56856 261 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 TDRG1Q3Y452 100 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 CT45A2Q5DJT8 189 aa9.1□□□□□ -0.95
VPS11-207ENST00000620429 LDLRAD2Q5SZI1 272 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms