RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 M0QZK8 103 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 GGCTO75223 188 aaKnown RBP9.49□□□□□ -0.89
UPF3A-212ENST00000619079 CYB5R3P00387 301 aaPredicted RBP9.49□□□□□ -0.89
UPF3A-212ENST00000619079 AMBPP02760 352 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 TK1P04183 234 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 IGHV4-34P06331 123 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 HNRNPA2B1P22626 353 aaKnown RBP9.49□□□□□ -0.89
UPF3A-212ENST00000619079 G0S2P27469 103 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 CD200P41217 278 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 NOVA1P51513 510 aaKnown RBP9.49□□□□□ -0.89
UPF3A-212ENST00000619079 HAGHQ16775 308 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 DPPA3Q6W0C5 159 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 FAM89BQ8N5H3 189 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 OR5L2Q8NGL0 311 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 OR1P1Q8NH06 330 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 BAHD1Q8TBE0 780 aaPredicted RBP9.49□□□□□ -0.89
UPF3A-212ENST00000619079 SLC25A36Q96CQ1 311 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 GNPNAT1Q96EK6 184 aaPredicted RBP9.49□□□□□ -0.89
UPF3A-212ENST00000619079 SCARF2Q96GP6 870 aaPredicted RBP9.49□□□□□ -0.89
UPF3A-212ENST00000619079 CTDSP1Q9GZU7 261 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 PBOV1Q9GZY1 135 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 PCED1AQ9H1Q7 454 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 GPR84Q9NQS5 396 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 CENPMQ9NSP4 180 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 ABCA7Q8IZY2 2146 aa9.49□□□□□ -0.89
UPF3A-212ENST00000619079 A0A1W2PPC4 97 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 PGA4P0DJD7 388 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 PGA5P0DJD9 388 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 CCR5P51681 352 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 CCL20P78556 96 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 IGLV3-21P80748 117 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-212ENST00000619079 ACY1Q03154 408 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 TLE4Q04727 773 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 FUT7Q11130 342 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 IQCJQ1A5X6 159 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 TMEM176BQ3YBM2 270 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-212ENST00000619079 FBXW12Q6X9E4 464 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 SHISA5Q8N114 240 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 NAXEQ8NCW5 288 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 OR10A7Q8NGE5 316 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 OR10G6Q8NH81 332 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 ZNF2Q9BSG1 426 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-212ENST00000619079 BANF2Q9H503 90 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 ZNF705GA8MUZ8 300 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-212ENST00000619079 PITX3O75364 302 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 MPZL1O95297 269 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 IL33O95760 270 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 LINC00614P0C842 121 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 NR2C1P13056 603 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 PNLIPP16233 465 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 CD27P26842 260 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 PCP4P48539 62 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 EIF3IQ13347 325 aaKnown RBP9.48□□□□□ -0.89
UPF3A-212ENST00000619079 C4orf17Q53FE4 359 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 SLC25A26Q70HW3 274 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 ZNF248Q8NDW4 579 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 ADAMTS18Q8TE60 1221 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 DAZLQ92904 295 aaKnown RBP9.48□□□□□ -0.89
UPF3A-212ENST00000619079 ACY3Q96HD9 319 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 CABLES2Q9BTV7 478 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 GOLT1BQ9Y3E0 138 aa9.48□□□□□ -0.89
UPF3A-212ENST00000619079 LOC101059948A0A1B0GTJ6 334 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 A0A1B0GU03 582 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 XRCC2O43543 280 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 UTS2O95399 124 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 DIRAS3O95661 229 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
UPF3A-212ENST00000619079 EPHA1P21709 976 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 LAMA1P25391 3075 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 ATP6V0CP27449 155 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 OR3A4PP47883 348 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 CSNK1A1P48729 337 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 RPL23AP62750 156 aaKnown RBP9.47□□□□□ -0.89
UPF3A-212ENST00000619079 EWSR1Q01844 656 aaKnown RBP eCLIP9.47□□□□□ -0.89
UPF3A-212ENST00000619079 LINC00346Q8IVM7 164 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 ZNF283Q8N7M2 679 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 OR51T1Q8NGJ9 327 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 CLDND2Q8NHS1 167 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 GPER1Q99527 375 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 APOOQ9BUR5 198 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 OR8D2Q9GZM6 311 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 NAA60Q9H7X0 242 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 SRD5A3Q9H8P0 318 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 MUC6Q6W4X9 2439 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 MED19A0JLT2 244 aaPredicted RBP9.47□□□□□ -0.89
UPF3A-212ENST00000619079 H0Y8X5 98 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 IL18BPO95998 194 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 CFIP05156 583 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 CCKARP32238 428 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 ERVFC1-1P60608 527 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 TMEM187Q14656 261 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 RAB35Q15286 201 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 ABCA11PQ4W5N1 156 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 DCAF10Q5QP82 559 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 ABLIM2Q6H8Q1 611 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 OR5AS1Q8N127 324 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 FBXL14Q8N1E6 418 aa9.47□□□□□ -0.89
UPF3A-212ENST00000619079 SLC35G3Q8N808 338 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms