RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 USF1P22415 310 aaPredicted RBP13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 RPS19P39019 145 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 TMBIM6P55061 237 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 SNU13P55769 128 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 CLDN12P56749 244 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 KCNJ8Q15842 424 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 FAM166AQ6J272 317 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 LYPD2Q6UXB3 125 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 SPICQ8N5J4 248 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 C12orf43Q96C57 262 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 HMG20AQ9NP66 347 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 PCDHB16Q9NRJ7 776 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 PCDHB10Q9UN67 800 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 CEPT1Q9Y6K0 416 aa13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 SETXQ7Z333 2677 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-204ENST00000617222 A0A1W2PP11 408 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 RFPL4AA6NLU0 287 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 OR2AT4A6NND4 320 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 CEACAM18A8MTB9 384 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 RFPL4AL1F8VTS6 287 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 TNFRSF13BO14836 293 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 ZNF780AO75290 641 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 KNG1P01042 644 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 CSTBP04080 98 aaKnown RBP13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 SLC2A2P11168 524 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 AMY2BP19961 511 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 SERPINA2P20848 420 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 DUSP1P28562 367 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 GABRA2P47869 451 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 BMXP51813 675 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 GPR176Q14439 515 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 ELP2Q6IA86 826 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 FIP1L1Q6UN15 594 aaKnown RBP13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 DCDC5Q6ZRR9 648 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 OR51D1Q8NGF3 324 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 CLDND2Q8NHS1 167 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 ANGPTL6Q8NI99 470 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 RAB2BQ8WUD1 216 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 C1orf147Q96MC9 270 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 CCL13Q99616 98 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 IL36GQ9NZH8 169 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 GHRLQ9UBU3 117 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 STEAP1Q9UHE8 339 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 TANC2Q9HCD6 1990 aa13.05□□□□□ -0.32
PCDHGC3-204ENST00000617222 IGKV1D-17A0A075B6S4 117 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 A0A096LNT2 108 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 CCDC160A6NGH7 325 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 AIPO00170 330 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 ADAM20O43506 726 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 NDUFA2O43678 99 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 NOL3O60936 208 aaKnown RBP13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 IL1AP01583 271 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 UBBP0CG47 229 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 VSIG8P0DPA2 414 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 PRDX2P32119 198 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 CEBPDP49716 269 aaPredicted RBP13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 FGF12P61328 243 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 DGUOKQ16854 277 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 C2orf76Q3KRA6 126 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 ATPAF1Q5TC12 328 aaPredicted RBP13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 STUMQ69YW2 141 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 OR10K2Q6IF99 312 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 SFXN4Q6P4A7 337 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 OSR2Q8N2R0 312 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 CD177Q8N6Q3 437 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 MAPK1IP1LQ8NDC0 245 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 Q8NFD4 153 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 NDNFQ8TB73 568 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 FAM3DQ96BQ1 224 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 KCNK15Q9H427 330 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 BANF2Q9H503 90 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 PATZ1Q9HBE1 687 aaKnown RBP13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 MIOXQ9UGB7 285 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 DAPK2Q9UIK4 370 aa13.04□□□□□ -0.32
PCDHGC3-204ENST00000617222 A0A0B4J203 849 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 H7C1Q1 480 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 CRTAPO75718 401 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 BPNT1O95861 308 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 WNT2P09544 360 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 GTF2F2P13984 249 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 ARSBP15848 533 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 RANBP1P43487 201 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 CAPZA1P52907 286 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 LMO4P61968 165 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 LOXL1Q08397 574 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 PDCD1Q15116 288 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 IDNKQ5T6J7 187 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 USP43Q70EL4 1123 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 CIARTQ8N365 385 aaPredicted RBP13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 TMEM104Q8NE00 496 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 FAM46BQ96A09 425 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 ISOC1Q96CN7 298 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 BCL7BQ9BQE9 202 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 DCSTAMPQ9H295 470 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 METRNQ9UJH8 293 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms