RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 RAB3CQ96E17 227 aa13.53□□□□□ -0.24
SEMA3B-212ENST00000616701 MED9Q9NWA0 146 aa13.53□□□□□ -0.24
SEMA3B-212ENST00000616701 SVILO95425 2214 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 A0A0A6YYH2 397 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 A6NJ64 397 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 PMP2P02689 132 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 CD79AP11912 226 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 SLC36A1Q7Z2H8 476 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 HSD17B13Q7Z5P4 300 aaPredicted RBP13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 SSC4DQ8WTU2 575 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 TMEM45BQ96B21 275 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 RYDENQ9NUL5 291 aaKnown RBP13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 PRSS50Q9UI38 385 aa13.52□□□□□ -0.24
SEMA3B-212ENST00000616701 IGKV3D-15A0A087WSY6 115 aa13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 MMP7P09237 267 aaPredicted RBP13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 ZNF735P0CB33 412 aa13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 NQO2P16083 231 aa13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 SPINK2P20155 84 aa13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 HRH1P35367 487 aa13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 ZNF626Q68DY1 528 aa13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 ZFP62Q8NB50 900 aaPredicted RBP13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 OR1S1Q8NH92 325 aa13.52□□□□□ -0.25
SEMA3B-212ENST00000616701 CEP250Q9BV73 2442 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 MEX3AA1L020 520 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 MTCP1P56278 107 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 ZNF100Q8IYN0 542 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 MUC20Q8N307 709 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 OR10J5Q8NHC4 309 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 S100A13Q99584 98 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 GGACTQ9BVM4 153 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 NPDC1Q9NQX5 325 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 ZNF581Q9P0T4 197 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 TRGV5A0A0B4J1U4 118 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 TMEM225BP0DP42 221 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 MGMTP16455 207 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 CXADRP78310 365 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 HABP2Q14520 560 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 PP6455Q8WZ26 134 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 APH1AQ96BI3 265 aa13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 GPN1Q9HCN4 374 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 ZNF230Q9UIE0 474 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-212ENST00000616701 IGKV1-27A0A075B6S5 117 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 GABRR1P24046 479 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 RAB2AP61019 212 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 PCBD1P61457 104 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 RIPPLY1Q0D2K3 151 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 RNASE10Q5GAN6 216 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 MARS2Q96GW9 593 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 OR51B6Q9H340 312 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 SEBOXQ9HB31 216 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 C4BPBP20851 252 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 RRADP55042 308 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 SOX8P57073 446 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 SSBP1Q04837 148 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 ARFRP1Q13795 201 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 DEFB109BQ30KR1 87 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 OR13C8Q8NGS7 320 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 PIGCQ92535 297 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 HAS2Q92819 552 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 PARPBPQ9NWS1 579 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 AKAP13Q12802 2813 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 HIST1H1DP16402 221 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 BLVRBP30043 206 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 GSK3AP49840 483 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 TNFSF10P50591 281 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 OR2W3Q7Z3T1 314 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 SPAG16Q8N0X2 631 aa13.5□□□□□ -0.25
SEMA3B-212ENST00000616701 PLSCR5A0PG75 271 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 C5orf52A6NGY3 159 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 MARCH11A6NNE9 402 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 GOSR2O14653 212 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 IL5P05113 134 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 FAM3AP98173 230 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 MICBQ29980 383 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 NKAPLQ5M9Q1 402 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 NCMAPQ5T1S8 102 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 CCDC54Q8NEL0 328 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 WDYHV1Q96HA8 205 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 ST6GALNAC5Q9BVH7 336 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 MGAQ8IWI9 3026 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 SPDEFO95238 335 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 CD74P04233 296 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 NFYBP25208 207 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 RBP2P50120 134 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 HIKESHIQ53FT3 197 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 ATPAF1Q5TC12 328 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 MOB3CQ70IA8 216 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 MICU1Q9BPX6 476 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 TCEAL7Q9BRU2 100 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 URM1Q9BTM9 101 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 CST11Q9H112 138 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 PIPOXQ9P0Z9 390 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 VSIG4Q9Y279 399 aa13.49□□□□□ -0.25
SEMA3B-212ENST00000616701 GVINP1Q7Z2Y8 2422 aa13.48□□□□□ -0.25
SEMA3B-212ENST00000616701 UBE2QL1A1L167 161 aa13.48□□□□□ -0.25
SEMA3B-212ENST00000616701 CHRM2P08172 466 aa13.48□□□□□ -0.25
SEMA3B-212ENST00000616701 MELTFP08582 738 aa13.48□□□□□ -0.25
SEMA3B-212ENST00000616701 NOVA1P51513 510 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms