RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	GPR137C	Q8N3F9	429 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	TXN2	Q99757	166 aa		13.8	□□□□□ -0.2
SYNRG-223	ENST00000616179	MDC1	Q14676	2089 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	TRBV6-7	A0A0A0MS04	114 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	HOXC4	P09017	264 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF154	Q13106	437 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	C1orf100	Q5SVJ3	147 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	DBX2	Q6ZNG2	339 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	LRRC3B	Q96PB8	259 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	HDAC8	Q9BY41	377 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	WFDC1	Q9HC57	220 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	PIGL	Q9Y2B2	252 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	OTOL1	A6NHN0	477 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	VSTM2B	A6NLU5	285 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	HSD17B6	O14756	317 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	ADH1B	P00325	375 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	TTR	P02766	147 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	CISD3	P0C7P0	127 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	CHRNA7	P36544	502 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	CARD18	P57730	90 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	HGFAC	Q04756	655 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	ESPL1	Q14674	2120 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	CNKSR3	Q6P9H4	555 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	SSX7	Q7RTT5	188 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	FAM60A	Q9NP50	221 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	PLEK2	Q9NYT0	353 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF320	A2RRD8	509 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR2J2	O76002	312 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	RPLP1	P05386	114 aa	Known RBP	13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	COX5B	P10606	129 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	GALR1	P47211	349 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	CEBPE	Q15744	281 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR1P1	Q8NH06	330 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	LHX4	Q969G2	390 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	RAB24	Q969Q5	203 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF845	Q96IR2	970 aa	Predicted RBP	13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	TMED3	Q9Y3Q3	217 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179		V9GYS6	101 aa		13.79	□□□□□ -0.2
SYNRG-223	ENST00000616179	DHRS7C	A6NNS2	312 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	SERPINE2	P07093	398 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	IAPP	P10997	89 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	IL11	P20809	199 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	HSF1	Q00613	529 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR51H1	Q8NH63	302 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	MRGPRF	Q96AM1	343 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF665	Q9H7R5	613 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	LAMA3	Q16787	3333 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	DRD3	P35462	400 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	GLIPR1	P48060	266 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR4F5	Q8NH21	305 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	BORCS8	Q96FH0	119 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR4F4	Q96R69	305 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	KLHDC3	Q9BQ90	382 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF43	P17038	809 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	SRSF4	Q08170	494 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	VAX1	Q5SQQ9	334 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	RTL6	Q6ICC9	239 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	OR8G2P	Q6IF36	304 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	ARHGEF39	Q8N4T4	335 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	TBX15	Q96SF7	602 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	NAA60	Q9H7X0	242 aa		13.78	□□□□□ -0.2
SYNRG-223	ENST00000616179	NKX2-6	A6NCS4	301 aa		13.77	□□□□□ -0.2
SYNRG-223	ENST00000616179	HOXB2	P14652	356 aa		13.77	□□□□□ -0.2
SYNRG-223	ENST00000616179	RPS16	P62249	146 aa	Known RBP	13.77	□□□□□ -0.2
SYNRG-223	ENST00000616179	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.77	□□□□□ -0.2
SYNRG-223	ENST00000616179	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.77	□□□□□ -0.2
SYNRG-223	ENST00000616179	PECR	Q9BY49	303 aa		13.77	□□□□□ -0.2
SYNRG-223	ENST00000616179	ZNF286A	Q9HBT8	521 aa		13.77	□□□□□ -0.2
SYNRG-223	ENST00000616179	SLC16A14	Q7RTX9	510 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	BAGE3	Q86Y29	109 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	BAGE2	Q86Y30	109 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	IL1F10	Q8WWZ1	152 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	PCGF1	Q9BSM1	259 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	TP53TG5	Q9Y2B4	290 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	TCF20	Q9UGU0	1960 aa	Known RBP	13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	IFITM10	A6NMD0	228 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179		C9J4A7	227 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	SIAH2	O43255	324 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	ZNF92	Q03936	586 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	AADACL3	Q5VUY0	350 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	ASPHD2	Q6ICH7	369 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	SPRED2	Q7Z698	418 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	GPX7	Q96SL4	187 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	C2orf88	Q9BSF0	95 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	PLEKHF2	Q9H8W4	249 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	PILRA	Q9UKJ1	303 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	MMACHC	Q9Y4U1	282 aa		13.77	□□□□□ -0.21
SYNRG-223	ENST00000616179	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.76	□□□□□ -0.21
SYNRG-223	ENST00000616179	ADAM20	O43506	726 aa		13.76	□□□□□ -0.21
SYNRG-223	ENST00000616179	ZNF217	O75362	1048 aa		13.76	□□□□□ -0.21
SYNRG-223	ENST00000616179	MT-ATP6	P00846	226 aa		13.76	□□□□□ -0.21
SYNRG-223	ENST00000616179	LCAT	P04180	440 aa		13.76	□□□□□ -0.21
SYNRG-223	ENST00000616179	SFTPC	P11686	197 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms