RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 OR5B2Q96R09 309 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 A0A1W2PR80 420 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 CBY3A6NI87 242 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 OR5H8P0DN80 308 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HOXA5P20719 270 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 PKIAP61925 76 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 ZNF880Q6PDB4 577 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 POC1BQ8TC44 478 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 RTN4IP1Q8WWV3 396 aaPredicted RBP11.56□□□□□ -0.56
MSH6-214ENST00000616033 AK3Q9UIJ7 227 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 STARD10Q9Y365 291 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 ZNF587BE7ETH6 402 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 MS4A18H0YCH9 400 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 MASP2O00187 686 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 NUTF2P61970 127 aaKnown RBP11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 KISS1Q15726 138 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 MS4A18Q3C1V0 323 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
MSH6-214ENST00000616033 ZNF429Q86V71 674 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HAS2Q92819 552 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 NTNG2Q96CW9 530 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
MSH6-214ENST00000616033 DOCK11Q5JSL3 2073 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 A6NCN8 305 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 SCGNO76038 276 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 GSTP1P09211 210 aaKnown RBP11.55□□□□□ -0.56
MSH6-214ENST00000616033 MYF5P13349 255 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 RAB11AP62491 216 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 OR5AS1Q8N127 324 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 TCTN2Q96GX1 697 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 PACRGQ96M98 296 aaPredicted RBP11.55□□□□□ -0.56
MSH6-214ENST00000616033 CHST5Q9GZS9 411 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 TUBA4BQ9H853 241 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 ZNF107Q9UII5 783 aaPredicted RBP11.55□□□□□ -0.56
MSH6-214ENST00000616033 IGHV5-51A0A0C4DH38 117 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 DANCRP0C864 163 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 TFPI2P48307 235 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 HEPN1Q6WQI6 88 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 PRRC2CQ9Y520 2896 aaKnown RBP11.55□□□□□ -0.56
MSH6-214ENST00000616033 DOCK7Q96N67 2140 aa11.55□□□□□ -0.56
MSH6-214ENST00000616033 HSPB2A8KAH6 182 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 E9PLN8 166 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 PGA4P0DJD7 388 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 PGA5P0DJD9 388 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 RPS2P15880 293 aaKnown RBP11.54□□□□□ -0.56
MSH6-214ENST00000616033 SLC6A8P48029 635 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 TAS2R46P59540 309 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 HSPB2Q16082 182 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 C9orf40Q8IXQ3 194 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 RNF133Q8WVZ7 376 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 LIPHQ8WWY8 451 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 PECRQ9BY49 303 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 COPS7AQ9UBW8 275 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 SRPK3Q9UPE1 567 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 OSGIN2Q9Y236 505 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 HDGFL3Q9Y3E1 203 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 HSPB6O14558 160 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 SSSCA1O60232 199 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 HLA-HP01893 362 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 HOXC4P09017 264 aaPredicted RBP11.54□□□□□ -0.56
MSH6-214ENST00000616033 TBPP20226 339 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 THBS4P35443 961 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 MMP16P51512 607 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 STARD6P59095 220 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 RND3P61587 244 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 VAX1Q5SQQ9 334 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 HIST2H3PS2Q5TEC6 136 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 GPR173Q9NS66 373 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 KLHL13Q9P2N7 655 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 RBFOX3A6NFN3 312 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 H3BMH7 237 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 SRSF10O75494 262 aaKnown RBP11.54□□□□□ -0.56
MSH6-214ENST00000616033 DXOO77932 396 aaKnown RBP11.54□□□□□ -0.56
MSH6-214ENST00000616033 CLPSP04118 112 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 TRGC1P0CF51 173 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 EPHA1P21709 976 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 CD200P41217 278 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 APOBEC1P41238 236 aaKnown RBP11.54□□□□□ -0.56
MSH6-214ENST00000616033 FAM3AP98173 230 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 GNMTQ14749 295 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 PPA1Q15181 289 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 ZNF574Q6ZN55 896 aaPredicted RBP11.54□□□□□ -0.56
MSH6-214ENST00000616033 SLC22A18ASQ8N1D0 253 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 OR10AD1Q8NGE0 317 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 FRZBQ92765 325 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 DDA1Q9BW61 102 aa11.54□□□□□ -0.56
MSH6-214ENST00000616033 NSG1A0A0A6YYJ2 146 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 IGKV1-9A0A0C4DH69 117 aa11.53□□□□□ -0.56
MSH6-214ENST00000616033 E5RGE8 158 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms