RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 SOCS1O15524 211 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 HPP00738 406 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 MUC1P15941 1255 aaPredicted RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 PAX5Q02548 391 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 TSPO2Q5TGU0 170 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 PRSS41Q7RTY9 318 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 RRP8O43159 456 aaKnown RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 HEXAP06865 529 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 FAM157BP0CG42 384 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 OR10J1P30954 320 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 FBXO46Q6PJ61 603 aaPredicted RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 OR1N1Q8NGS0 311 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 MRPL24Q96A35 216 aaKnown RBP16.76■□□□□ 0.27
SPAST-203ENST00000615843 ST6GALNAC2Q9UJ37 374 aa16.76■□□□□ 0.27
SPAST-203ENST00000615843 NAAAQ02083 359 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 ANXA10Q9UJ72 324 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 TEX50A0A1B0GTY4 177 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 SEC11BP0C7V7 166 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 TMEM178AQ8NBL3 297 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 UBALD1Q8TB05 177 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 SLC52A3Q9NQ40 469 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 FUT9Q9Y231 359 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 ZGLP1P0C6A0 271 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 LPAR6P43657 344 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 LIAT1Q6ZQX7 453 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 C11orf42Q8N5U0 333 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 FOXB1Q99853 325 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 ZFP36L2P47974 494 aaKnown RBP16.75■□□□□ 0.27
SPAST-203ENST00000615843 EFNB2P52799 333 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 DUSP2Q05923 314 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 MPV17LQ2QL34 196 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 OR11G2Q8NGC1 345 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 OR10AC1Q8NH08 325 aa16.75■□□□□ 0.27
SPAST-203ENST00000615843 FBP1P09467 338 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 BMP5P22003 454 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 ZIC1Q15915 447 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 MICBQ29980 383 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 MESTQ5EB52 335 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 STUMQ69YW2 141 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 FGF14Q92915 247 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 APOBEC3DQ96AK3 386 aaPredicted RBP16.74■□□□□ 0.27
SPAST-203ENST00000615843 OR2A5Q96R48 311 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
SPAST-203ENST00000615843 ITGB4P16144 1822 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 C1QCP02747 245 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 GNB1P62873 340 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 PRDX4Q13162 271 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 HES1Q14469 280 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 DPPA3Q6W0C5 159 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 ELSPBP1Q96BH3 223 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 MRPS24Q96EL2 167 aaKnown RBP16.74■□□□□ 0.27
SPAST-203ENST00000615843 ZMIZ1Q9ULJ6 1067 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 VSIG4Q9Y279 399 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 HRASP01112 189 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 CT62P0C5K7 136 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 CBLN3Q6UW01 205 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 MANBALQ9NQG1 85 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 VAX2Q9UIW0 290 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 PLPP3O14495 311 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 HLA-GP17693 338 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 TMEM215Q68D42 235 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 OR11H4Q8NGC9 324 aa16.74■□□□□ 0.27
SPAST-203ENST00000615843 DMWDQ09019 674 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 ZNF880Q6PDB4 577 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 VN1R4Q7Z5H5 301 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 ZNF707Q96C28 371 aaPredicted RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 ACY3Q96HD9 319 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 THOC3Q96J01 351 aaKnown RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 FER1L6-AS2Q96M78 137 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 NGBQ9NPG2 151 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 TMEM30CPA0ZSE6 113 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 BMPR1BO00238 502 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 ZNF547Q8IVP9 402 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 FAM219AQ8IW50 185 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 TMEM147Q9BVK8 224 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 OR51M1Q9H341 326 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 ZNF391Q9UJN7 358 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 NHSQ6T4R5 1651 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 RPS4XP62701 263 aaKnown RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 OR10V1Q8NGI7 309 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 BARX1Q9HBU1 254 aaPredicted RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 CD160O95971 181 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 ATP6V1FQ16864 119 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 DHRS7BQ6IAN0 325 aaPredicted RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 OR10C1Q96KK4 312 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 NDFIP1Q9BT67 221 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 GSX1Q9H4S2 264 aaPredicted RBP16.73■□□□□ 0.27
SPAST-203ENST00000615843 ZFP64Q9NPA5 681 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 MMP17Q9ULZ9 603 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 CYC1P08574 325 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 CEACAM6P40199 344 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 EWSR1Q01844 656 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPAST-203ENST00000615843 OR5I1Q13606 314 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 ACSM6Q6P461 480 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 LRP11Q86VZ4 500 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 OR10X1Q8NGY0 326 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 MCHR2Q969V1 340 aa16.73■□□□□ 0.27
SPAST-203ENST00000615843 MRGPRX1Q96LB2 322 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms