RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 CTLA4P16410 223 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 IGFBP3P17936 291 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 UCP3P55916 312 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 PLAC9Q5JTB6 97 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 C1orf140Q5VVS0 124 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 LGI3Q8N145 548 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 DEFB119Q8N690 84 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 TMEM52Q8NDY8 209 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 KCNG3Q8TAE7 436 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 RNASE8Q8TDE3 154 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 RERGQ96A58 199 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 FAM71F1Q96KD3 344 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 STARD5Q9NSY2 213 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 VAX2Q9UIW0 290 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 NXT1Q9UKK6 140 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 SLC5A6Q9Y289 635 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 R4GMQ9 66 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 B4DEV8 164 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 RAD51DO75771 328 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 CRYABP02511 175 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 CD55P08174 381 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 MLF1P58340 268 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 GAGE1Q13065 139 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 ACKR1Q16570 336 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 ZNF542PQ5EBM4 170 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR52N5Q8NH56 324 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 ADAT3Q96EY9 351 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 PCGF1Q9BSM1 259 aa9.13□□□□□ -0.95
TNFAIP3-208ENST00000615468 HSPB2A8KAH6 182 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 HPNP05981 417 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 FSTP19883 344 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 FGF8P55075 233 aaPredicted RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 RPS4XP62701 263 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 PSG6Q00889 435 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 HSPB2Q16082 182 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 C1orf194Q5T5A4 169 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 WBP2NLQ6ICG8 309 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 LINC00114Q6XXX2 140 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 SCARF2Q96GP6 870 aaPredicted RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 TP53RKQ96S44 253 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR2J1Q9GZK6 312 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 LPAR5Q9H1C0 372 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 VCANP13611 3396 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 EML5Q05BV3 1969 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 IGKV1D-42A0A075B6H8 117 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 CDC14CA4D256 554 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 HLA-HP01893 362 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 HBE1P02100 147 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 TMEM225BP0DP42 221 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 PNMTP11086 282 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR10J1P30954 320 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 CCKARP32238 428 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR3A4PP47883 348 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 RAB7AP51149 207 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 EWSR1Q01844 656 aaKnown RBP eCLIP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 CST6Q15828 149 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 PCK2Q16822 640 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 MAJINQ3KP22 176 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 CBLN3Q6UW01 205 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 ZNF440Q8IYI8 595 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR52M1Q8NGK5 317 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR5C1Q8NGR4 320 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR2AJ1Q8NGZ0 328 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 C5orf34Q96MH7 638 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 FOXQ1Q9C009 403 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 SRPK3Q9UPE1 567 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 POLR3KQ9Y2Y1 108 aaPredicted RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 PPIAL4AQ9Y536 164 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 K7EQS6 105 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 LCATP04180 440 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 HSD11B1P28845 292 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 CHRNB4P30926 498 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 RABIFP47224 123 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 RPS15AP62244 130 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 FAM189A2Q15884 450 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 COL5A1-AS1Q5SY13 56 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 ADAMTS18Q8TE60 1221 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 RTN4IP1Q8WWV3 396 aaPredicted RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 HLA-CQ95604 372 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 RPUSD4Q96CM3 377 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 MRGPRX4Q96LA9 322 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 SRD5A3Q9H8P0 318 aa9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 PATZ1Q9HBE1 687 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 MRPS2Q9Y399 296 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-208ENST00000615468 TCRBV21S2A2A0A5A6 115 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 PRSS37A4D1T9 235 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 ANKUB1A6NFN9 424 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 B4E171 279 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 NKX2-2O95096 273 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 PRICKLE4Q2TBC4 344 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 LEMD1Q68G75 181 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 CHRDL2Q6WN34 429 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 DGAT2L6Q6ZPD8 337 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 DAZLQ92904 295 aaKnown RBP9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 GPX7Q96SL4 187 aaPredicted RBP9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 CCDC3Q9BQI4 270 aa9.11□□□□□ -0.95
TNFAIP3-208ENST00000615468 OR10A2Q9H208 303 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms