RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TMEM106AQ96A25 262 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 OPA3Q9H6K4 179 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 HES4Q9HCC6 221 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 POLR3KQ9Y2Y1 108 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 SIGLEC5O15389 551 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 MTRF1O75570 445 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 RPSAP08865 295 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 ACAA1P09110 424 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 PRKACAP17612 351 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 CFL1P23528 166 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 BMXP51813 675 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 CAPZA1P52907 286 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 NLRC3Q7RTR2 1065 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 FAM185AQ8N0U4 392 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 TSEN15Q8WW01 171 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 LEAP2Q969E1 77 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 ERGIC1Q969X5 290 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 CHIAQ9BZP6 476 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 J3QT63 122 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ZNF737O75373 536 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 IGHV4-59P01825 116 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 MT-ND2P03891 347 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 COX7A1P24310 79 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 CD24P25063 80 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 MPZP25189 248 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 EDDM3BP56851 147 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ZP1P60852 638 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 PLA2G7Q13093 441 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 SLC9A3R2Q15599 337 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 C6orf141Q5SZD1 244 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 OR10K2Q6IF99 312 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 FDX2Q6P4F2 183 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 SPERTQ8NA61 448 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 UPRTQ96BW1 309 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 BORCS8Q96FH0 119 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 PPA2Q9H2U2 334 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 NUP50Q9UKX7 468 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 HHLA2Q9UM44 414 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 DIMT1Q9UNQ2 313 aaKnown RBP4.66□□□□□ -1.66
CPNE3-208ENST00000614678 SHISA3A0PJX4 238 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ZNF879B4DU55 563 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 TCF21O43680 179 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 MAS1P04201 325 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ISG15P05161 165 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 MUC1P15941 1255 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ATF1P18846 271 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 GLIPR1P48060 266 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ACTC1P68032 377 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ACTA1P68133 377 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 AESQ08117 197 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 PDZK1IP1Q13113 114 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ATXN7L3Q14CW9 347 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-208ENST00000614678 KISS1Q15726 138 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 FTMTQ8N4E7 242 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 EMG1Q92979 244 aaKnown RBP4.66□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM80Q96HE8 168 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 OPALINQ96PE5 141 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 MNTQ99583 582 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 TMED9Q9BVK6 235 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 JAM3Q9BX67 310 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 CDCA4Q9BXL8 241 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 FAM192AQ9GZU8 254 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 MOB1AQ9H8S9 216 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 FKBP14Q9NWM8 211 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 BABAM2Q9NXR7 383 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 KAAG1Q9UBP8 84 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM210A6NLX4 147 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 GABRPO00591 440 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 NDUFB3O43676 98 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 TK1P04183 234 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 OCM2P0CE71 109 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 UBCP0CG48 685 aaKnown RBP4.66□□□□□ -1.66
CPNE3-208ENST00000614678 ZNF20P17024 532 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 HILS1P60008 231 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 IL13RA1P78552 427 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 TTC23Q5W5X9 447 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 DMKNQ6E0U4 476 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-208ENST00000614678 LY6G5BQ8NDX9 201 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 CEP19Q96LK0 163 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 MRI1Q9BV20 369 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 CNTD2Q9H8S5 307 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 LSM2Q9Y333 95 aaKnown RBP4.66□□□□□ -1.66
CPNE3-208ENST00000614678 SIGLEC9Q9Y336 463 aa4.66□□□□□ -1.66
CPNE3-208ENST00000614678 A0A1W2PQ09 198 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 OR5B21A6NL26 309 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 HCKP08631 526 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 HSMCR30P0CW71 290 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 HNF1AP20823 631 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 KRTAP21-3Q3LHN1 58 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 BTNL3Q6UXE8 466 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 SYS1Q8N2H4 156 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM104Q8NE00 496 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 RPS4Y2Q8TD47 263 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 MS4A7Q9GZW8 240 aaPredicted RBP4.65□□□□□ -1.66
CPNE3-208ENST00000614678 TGP01266 2768 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 FAM181BA6NEQ2 426 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 OR2H2O95918 312 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM225BP0DP42 221 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 DCKP27707 260 aa4.65□□□□□ -1.66
CPNE3-208ENST00000614678 RBP2P50120 134 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms