RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 GPA33Q99795 319 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 KLF16Q9BXK1 252 aaPredicted RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 FHITP49789 147 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 TMEM176BQ3YBM2 270 aaPredicted RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 JMJD6Q6NYC1 403 aaPredicted RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 OTOSQ8NHW6 89 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 ARHGAP5-AS1Q96IT6 56 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 DOK5Q9P104 306 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 KCND3Q9UK17 655 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 UBE2CO00762 179 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 LANCL1O43813 399 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 RGRP47804 291 aa12.34□□□□□ -0.43
CHD1-212ENST00000614616 APOBEC3BQ9UH17 382 aaKnown RBP12.34□□□□□ -0.43
CHD1-212ENST00000614616 MBLAC1A4D2B0 266 aaPredicted RBP12.33□□□□□ -0.43
CHD1-212ENST00000614616 OR5B21A6NL26 309 aa12.33□□□□□ -0.43
CHD1-212ENST00000614616 FCARP24071 287 aa12.33□□□□□ -0.43
CHD1-212ENST00000614616 TMEM136Q6ZRR5 245 aa12.33□□□□□ -0.43
CHD1-212ENST00000614616 ERASQ7Z444 233 aa12.33□□□□□ -0.43
CHD1-212ENST00000614616 TMEM25Q86YD3 366 aa12.33□□□□□ -0.43
CHD1-212ENST00000614616 GALMQ96C23 342 aa12.33□□□□□ -0.43
CHD1-212ENST00000614616 GLIPR1P48060 266 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 NCOR1P1Q9H4R4 102 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 PRSS38A1L453 326 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 CFDP00746 253 aaPredicted RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 MLF2Q15773 248 aaPredicted RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 PPP1R3EQ9H7J1 279 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 SH2D2AQ9NP31 389 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 SLC6A13Q9NSD5 602 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 DHCR7Q9UBM7 475 aaKnown RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 LRP12Q9Y561 859 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 LRRC3CA6NJW4 275 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 PRKRAO75569 313 aaKnown RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 BTF3P20290 206 aaKnown RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 COL24A1Q17RW2 1714 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 CEBPDP49716 269 aaPredicted RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 SIGLEC14Q08ET2 396 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 MARCH3Q86UD3 253 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 ORAI1Q96D31 301 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 EID2BQ96D98 161 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 TMEM147Q9BVK8 224 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 B3GALT4O96024 378 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 SMAD2Q15796 467 aaKnown RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 UBTD1Q9HAC8 227 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 RBPJLQ9UBG7 517 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 POLDIP2Q9Y2S7 368 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 MASP2O00187 686 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 MRPL33O75394 65 aaKnown RBP12.33□□□□□ -0.44
CHD1-212ENST00000614616 HLA-DQB1P01920 261 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 BMI1P35226 326 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 IER3P46695 156 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 CTAG1AP78358 180 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 PARM1Q6UWI2 310 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 SAP30LQ9HAJ7 183 aa12.33□□□□□ -0.44
CHD1-212ENST00000614616 SIRPB1O00241 398 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 EIF4E2O60573 245 aaKnown RBP12.32□□□□□ -0.44
CHD1-212ENST00000614616 ICOSLGO75144 302 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
CHD1-212ENST00000614616 CAMPP49913 170 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 KMT5CQ86Y97 462 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 APOOQ9BUR5 198 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 OR5AC2Q9NZP5 309 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
CHD1-212ENST00000614616 ZNF750Q32MQ0 723 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 PWWP2BQ6NUJ5 590 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 NUFIP2Q7Z417 695 aaKnown RBP12.32□□□□□ -0.44
CHD1-212ENST00000614616 TTC9BQ8N6N2 239 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 ZDHHC8Q9ULC8 765 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 TIMM9Q9Y5J7 89 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 OPN1LWP04000 364 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 MBD3L1Q8WWY6 194 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 ASB1Q9Y576 335 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 UPK1AO00322 258 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 FGF18O76093 207 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 TMEM215Q68D42 235 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 KCNK7Q9Y2U2 307 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 TCRBV21S2A2A0A5A6 115 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 CORTO00230 105 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 FBLIM1Q8WUP2 373 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 AKIRIN1Q9H9L7 192 aaPredicted RBP12.32□□□□□ -0.44
CHD1-212ENST00000614616 HTR3DQ70Z44 454 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 OLIG3Q7RTU3 272 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 OR5A2Q8NGI9 324 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 TMEM167BQ9NRX6 74 aa12.32□□□□□ -0.44
CHD1-212ENST00000614616 RECKO95980 971 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 SOD3P08294 240 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 STRADBQ9C0K7 418 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 CES1P1Q9UKY3 287 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 SLC22A13Q9Y226 551 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 CDC14BO60729 498 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 ERV3-1Q14264 604 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 C19orf53Q9UNZ5 99 aaPredicted RBP12.31□□□□□ -0.44
CHD1-212ENST00000614616 MT-ND6P03923 174 aa12.31□□□□□ -0.44
CHD1-212ENST00000614616 CD1CP29017 333 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms