RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.37
CDH1-213ENST00000612417 URB1O60287 2271 aaKnown RBP12.77□□□□□ -0.37
CDH1-213ENST00000612417 DNAJC13O75165 2243 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 TMEM218A2RU14 115 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 SGCEO43556 437 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 ATG12O94817 140 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 SP1P08047 785 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 CD46P15529 392 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 KRTAP27-1Q3LI81 207 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 NKAPLQ5M9Q1 402 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 PLXDC2Q6UX71 529 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 C6orf201Q7Z4U5 140 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 MAFIPQ8WZ33 124 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 ZNF837Q96EG3 531 aaPredicted RBP12.76□□□□□ -0.37
CDH1-213ENST00000612417 NKX6-2Q9C056 277 aaPredicted RBP12.76□□□□□ -0.37
CDH1-213ENST00000612417 PLEKHJ1Q9NW61 149 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 C1orf123Q9NWV4 160 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 PRR13Q9NZ81 148 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 MEMO1Q9Y316 297 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 IFNA2P01563 188 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 SERPINA5P05154 406 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 WT1P19544 449 aaPredicted RBP12.76□□□□□ -0.37
CDH1-213ENST00000612417 ACKR3P25106 362 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 PTGER4P35408 488 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 DEFA5Q01523 94 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 RAB32Q13637 225 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 RPUSD3Q6P087 351 aaKnown RBP12.76□□□□□ -0.37
CDH1-213ENST00000612417 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 ARL11Q969Q4 196 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 TTTY12Q9BZ98 90 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 SLC5A7Q9GZV3 580 aa12.76□□□□□ -0.37
CDH1-213ENST00000612417 ELL3Q9HB65 397 aaPredicted RBP12.76□□□□□ -0.37
CDH1-213ENST00000612417 ZNF701Q9NV72 531 aaPredicted RBP12.76□□□□□ -0.37
CDH1-213ENST00000612417 KLF13Q9Y2Y9 288 aaPredicted RBP12.76□□□□□ -0.37
CDH1-213ENST00000612417 ZNF407Q9C0G0 2248 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 ZNF98A6NK75 572 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 KLRC4-KLRK1H3BQV0 150 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 CTSDP07339 412 aaPredicted RBP12.75□□□□□ -0.37
CDH1-213ENST00000612417 MEOX1P50221 254 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 MTCP1P56278 107 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 TSC22D1Q15714 1073 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 ASCL4Q6XD76 172 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 CPT1CQ8TCG5 803 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 TMED6Q8WW62 240 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 NARS2Q96I59 477 aaKnown RBP12.75□□□□□ -0.37
CDH1-213ENST00000612417 METTL9Q9H1A3 318 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 ZNF703Q9H7S9 590 aaPredicted RBP12.75□□□□□ -0.37
CDH1-213ENST00000612417 TMEM38BQ9NVV0 291 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 ZNF391Q9UJN7 358 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 SPTBN2O15020 2390 aa12.75□□□□□ -0.37
CDH1-213ENST00000612417 OR6C6A6NF89 314 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 TAAR5O14804 337 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 CXCL13O43927 109 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 NME2P1O60361 137 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 CELA3AP09093 270 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 NME2P22392 152 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 DTYMKP23919 212 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 GABRR1P24046 479 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 MAGEA5P43359 124 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 RTP5Q14D33 572 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 C10orf91Q5T1B1 145 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 TMEM42Q69YG0 159 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 ZNF585AQ6P3V2 769 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 GGNQ86UU5 652 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 MDS2Q8NDY4 140 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 OR51F2Q8NH61 342 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 OR1F12Q8NHA8 337 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 OR2V1Q8NHB1 315 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 REEP6Q96HR9 211 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 MMP26Q9NRE1 261 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 GPR173Q9NS66 373 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 ANXA10Q9UJ72 324 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 CRYM-AS1A6NIL9 109 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 ZNF716A6NP11 495 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 ABCD4O14678 606 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 MSTNO14793 375 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 SIGLEC5O15389 551 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 ACTL6AO96019 429 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 TMEM225BP0DP42 221 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 RBMXP38159 391 aaKnown RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 SOX8P57073 446 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 EIF5AP63241 154 aaKnown RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 HGFACQ04756 655 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 CLN3Q13286 438 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 Q3ZCU0 254 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 IL34Q6ZMJ4 242 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 ZNF100Q8IYN0 542 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 CLRN3Q8NCR9 226 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
CDH1-213ENST00000612417 ZNF775Q96BV0 537 aaPredicted RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 SAT2Q96F10 170 aaPredicted RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 ZNF2Q9BSG1 426 aaPredicted RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 ZNF552Q9H707 407 aaPredicted RBP12.74□□□□□ -0.37
CDH1-213ENST00000612417 LPAR3Q9UBY5 353 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms