RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 SBSPONQ8IVN8 264 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PNKDQ8N490 385 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CELF2-AS1Q8N7Q2 184 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 YIPF7Q8N8F6 280 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 BEND2Q8NDZ0 799 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 C19orf18Q8NEA5 215 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CSNK2A3Q8NEV1 391 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 OR8G5Q8NG78 346 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 OR52I1Q8NGK6 324 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 OR13G1Q8NGZ3 307 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 C8orf46Q8TAG6 207 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 GATAD1Q8WUU5 269 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SPRYD4Q8WW59 207 aaPredicted RBP5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SGK3Q96BR1 496 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 TMEM80Q96HE8 168 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 REEP6Q96HR9 211 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 TECTBQ96PL2 329 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PBOV1Q9GZY1 135 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 EDA2RQ9HAV5 297 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SMURF1Q9HCE7 757 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 AMBNQ9NP70 447 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ABCB9Q9NP78 766 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 FAM206AQ9NX38 181 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ERVK13-1Q9NX77 482 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SCN3BQ9NY72 215 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PTTG3PQ9NZH4 202 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 MRPL15Q9P015 296 aaKnown RBP5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 NUFIP1Q9UHK0 495 aaKnown RBP5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 MRM2Q9UI43 246 aaKnown RBP5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 BLOC1S6Q9UL45 172 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 DIMT1Q9UNQ2 313 aaKnown RBP5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 EXOSC1Q9Y3B2 195 aaKnown RBP5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 TPRKBQ9Y3C4 175 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 KPTNQ9Y664 436 aa5.79□□□□□ -1.48
PTCHD3P1-201ENST00000612350 hCG_38984A0A1B0GV85 526 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 A0A1B0GVI7 797 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 GGT3PA6NGU5 568 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CD300LBA8K4G0 201 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PRR32B1ATL7 298 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 LOC110117498-PIK3R3F6TDL0 507 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PSMD9O00233 223 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 DENRO43583 198 aaKnown RBP5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 GMDSO60547 372 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 RAMP3O60896 148 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SRSF10O75494 262 aaKnown RBP5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 APOL3O95236 402 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PAHP00439 452 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 IGLV3-1P01715 115 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SLC2A1P11166 492 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CCR9P51686 369 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 DLX1P56177 255 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 FAM3AP98173 230 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ST3GAL4Q11206 333 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 OR8B8Q15620 311 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SMN1Q16637 294 aaKnown RBP5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 CCDC58Q4VC31 144 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 C6orf141Q5SZD1 244 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 GLYATL3Q5SZD4 288 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 BCL2L15Q5TBC7 163 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 OR2T2Q6IF00 324 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 Q6ZSR3 168 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 SSX6Q7RTT6 188 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 MRPL41Q8IXM3 137 aaKnown RBP5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ELMOD2Q8IZ81 293 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 STX19Q8N4C7 294 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 BPIFB6Q8NFQ5 453 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 OR8B12Q8NGG6 310 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PIFOQ8TCI5 191 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 C17orf50Q8WW18 174 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 DDB2Q92466 427 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 GGHQ92820 318 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 TNFRSF14Q92956 283 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 MYDGFQ969H8 173 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ERGIC1Q969X5 290 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 C10orf35Q96D05 121 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 AJUBAQ96IF1 538 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PRR25Q96S07 402 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 MUC4Q99102 2169 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 TBX5Q99593 518 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ZNF649Q9BS31 505 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 DCTN5Q9BTE1 182 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ALG8Q9BVK2 526 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 YTHDF1Q9BYJ9 559 aaKnown RBP5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 MEGF9Q9H1U4 602 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 POFUT1Q9H488 388 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 RAB18Q9NP72 206 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 TMEM100Q9NV29 134 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 FKBP14Q9NWM8 211 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ERVK-18Q9QC07 812 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 AASSQ9UDR5 926 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 PSORS1C1Q9UIG5 152 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 GNG8Q9UK08 70 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 OR52A1Q9UKL2 312 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 MYRFQ9Y2G1 1151 aa5.78□□□□□ -1.48
PTCHD3P1-201ENST00000612350 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.77□□□□□ -1.49
PTCHD3P1-201ENST00000612350 ANKRD30BLA7E2S9 258 aa5.77□□□□□ -1.49
PTCHD3P1-201ENST00000612350 J3QLW9 94 aa5.77□□□□□ -1.49
PTCHD3P1-201ENST00000612350 SLC1A7O00341 560 aa5.77□□□□□ -1.49
PTCHD3P1-201ENST00000612350 MRPS14O60783 128 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms