RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	C14orf166	Q9Y224	244 aa	Known RBP	11.24	□□□□□ -0.61
SMTN-222	ENST00000612341	ZNF407	Q9C0G0	2248 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	IGKV1-27	A0A075B6S5	117 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	CRYBA1	P05813	215 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	GP1BA	P07359	652 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	TSPO2	Q5TGU0	170 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	CLEC9A	Q6UXN8	241 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	OR10D3	Q8NH80	312 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	GLYATL2	Q8WU03	294 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	SMIM3	Q9BZL3	60 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	LOC400499	M0QZD8	3231 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	CTSS	P25774	331 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	RAC3	P60763	192 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	ZFP36L1	Q07352	338 aa	Known RBP	11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	FAM27B	Q5VT28	67 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	PIGC	Q92535	297 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	BORCS8	Q96FH0	119 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	C14orf144	Q96I85	54 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	DEPP	Q9NTK1	212 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	OSGIN2	Q9Y236	505 aa		11.23	□□□□□ -0.61
SMTN-222	ENST00000612341	NTN3	O00634	580 aa	Predicted RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	CCL2	P13500	99 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	TPT1	P13693	172 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	PTGER4	P35408	488 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	RBMX	P38159	391 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	TAS2R60	P59551	318 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	CYCS	P99999	105 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	FAM76B	Q5HYJ3	339 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	SLC23A3	Q6PIS1	610 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	SLC16A14	Q7RTX9	510 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	SULF2	Q8IWU5	870 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	BAP18	Q8IXM2	172 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	OR1F12	Q8NHA8	337 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	SCGB3A2	Q96PL1	93 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	NMES1	Q9C002	83 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	PADI1	Q9ULC6	663 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	SERPINE3	A8MV23	424 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	GEMIN2	O14893	280 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	H2AFB1	P0C5Y9	115 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	MRPS34	P82930	218 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	SRSF3	P84103	164 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	RIPPLY1	Q0D2K3	151 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	FAM189A2	Q15884	450 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	IAH1	Q2TAA2	248 aa	Predicted RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	TMEM105	Q8N8V8	129 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	METTL9	Q9H1A3	318 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341		A0A096LPE4	126 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341		A0A1W2PPZ6	126 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	PINLYP	A6NC86	204 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	GPR31	O00270	319 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	IGLV3-1	P01715	115 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	OR5H8	P0DN80	308 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	DUSP3	P51452	185 aa	Predicted RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	PSG4	Q00888	419 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	LHFPL1	Q86WI0	220 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	PARP12	Q9H0J9	701 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	HRH4	Q9H3N8	390 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	RAB18	Q9NP72	206 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	AK3	Q9UIJ7	227 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	TCFL5	Q9UL49	500 aa		11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	LSM5	Q9Y4Y9	91 aa	Known RBP	11.22	□□□□□ -0.61
SMTN-222	ENST00000612341	AGPAT2	O15120	278 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	TCAP	O15273	167 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	FBXO24	O75426	580 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	F12	P00748	615 aa	Predicted RBP	11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	RCC1	P18754	421 aa	Predicted RBP	11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	OTX1	P32242	354 aa	Predicted RBP	11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	GNG10	P50151	68 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	B3GALT5-AS1	P59052	145 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	AARD	Q4LEZ3	155 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	PHLDA2	Q53GA4	152 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	RPUSD3	Q6P087	351 aa	Known RBP	11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	C16orf54	Q6UWD8	224 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	PPP1R32	Q7Z5V6	425 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	FBXL14	Q8N1E6	418 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	RHBDD1	Q8TEB9	315 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	EMG1	Q92979	244 aa	Known RBP	11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	CPNE2	Q96FN4	548 aa	Predicted RBP	11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	FOXB1	Q99853	325 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	TMEM38B	Q9NVV0	291 aa		11.21	□□□□□ -0.61
SMTN-222	ENST00000612341	FIGNL2	A6NMB9	653 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	GJE1	A6NN92	205 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	SYNGR3	O43761	229 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	TIPARP	Q7Z3E1	657 aa	Known RBP	11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	PEG10	Q86TG7	708 aa	Known RBP	11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	GGN	Q86UU5	652 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	SVIP	Q8NHG7	77 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	SGCZ	Q96LD1	299 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	SULT4A1	Q9BR01	284 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	FAM117A	Q9C073	453 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	LIME1	Q9H400	295 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	SH2D2A	Q9NP31	389 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	ANAPC10	Q9UM13	185 aa		11.21	□□□□□ -0.62
SMTN-222	ENST00000612341	MSTN	O14793	375 aa		11.2	□□□□□ -0.62
SMTN-222	ENST00000612341	CER1	O95813	267 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms