RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZNF574Q6ZN55 896 aaPredicted RBP17.79■□□□□ 0.44
SSBP3-216ENST00000610401 RASL10BQ96S79 203 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 ULBP2Q9BZM5 246 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 GPR27Q9NS67 375 aa17.79■□□□□ 0.44
SSBP3-216ENST00000610401 FREM1Q5H8C1 2179 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 ARPC4-TTLL3A0A0A6YYG9 625 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 FIGNL2A6NMB9 653 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 DHRS3O75911 302 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 CCL2P13500 99 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 SNCAP37840 140 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 IZUMO4Q1ZYL8 232 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 OXGR1Q96P68 337 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 IGKV1-27A0A075B6S5 117 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 IGHV3-64DA0A0J9YX35 117 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 TLX3O43711 291 aaPredicted RBP17.78■□□□□ 0.44
SSBP3-216ENST00000610401 MSR1P21757 451 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 GUSBP11Q6P575 273 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 C5orf46Q6UWT4 87 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 MRGPRX4Q96LA9 322 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 SLC2A9Q9NRM0 540 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 DNAJB11Q9UBS4 358 aa17.78■□□□□ 0.44
SSBP3-216ENST00000610401 SSSCA1O60232 199 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 RAB5AP20339 215 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 EPHA1P21709 976 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 MDKP21741 143 aaPredicted RBP17.77■□□□□ 0.44
SSBP3-216ENST00000610401 IL15RAQ13261 267 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 C4orf17Q53FE4 359 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 NFAM1Q8NET5 270 aaPredicted RBP17.77■□□□□ 0.44
SSBP3-216ENST00000610401 UBALD1Q8TB05 177 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 NAT6Q93015 286 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 PARP11Q9NR21 331 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 ADAMTS9Q9P2N4 1935 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 CLN5O75503 358 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 NDUFA6P56556 154 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 SLC7A11Q9UPY5 501 aa17.77■□□□□ 0.44
SSBP3-216ENST00000610401 DCHS1Q96JQ0 3298 aa17.77■□□□□ 0.43
SSBP3-216ENST00000610401 PQLC2LA1A4F0 135 aa17.77■□□□□ 0.43
SSBP3-216ENST00000610401 GJC3Q8NFK1 279 aa17.77■□□□□ 0.43
SSBP3-216ENST00000610401 NEK7Q8TDX7 302 aa17.77■□□□□ 0.43
SSBP3-216ENST00000610401 LUZP4Q9P127 313 aa17.77■□□□□ 0.43
SSBP3-216ENST00000610401 ZDHHC8Q9ULC8 765 aa17.77■□□□□ 0.43
SSBP3-216ENST00000610401 KPTNQ9Y664 436 aa17.77■□□□□ 0.43
SSBP3-216ENST00000610401 DNAJC13O75165 2243 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 H7C1Q1 480 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 PTGDSP41222 190 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 NSUN5P2Q63ZY6 315 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 OR2M3Q8NG83 312 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 OR6X1Q8NH79 312 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 OR51B6Q9H340 312 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 ST3GAL6Q9Y274 331 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 BORCS7-ASMTA0A0B4J1R7 106 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 C5orf52A6NGY3 159 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 CRYM-AS1A6NIL9 109 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 FAM157AC9JC47 383 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 ZFAND5O76080 213 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 YRDCQ86U90 279 aaKnown RBP17.76■□□□□ 0.43
SSBP3-216ENST00000610401 SLC35G3Q8N808 338 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 OR2G3Q8NGZ4 309 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 HAS2Q92819 552 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 BORCS8Q96FH0 119 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 TP53RKQ96S44 253 aa17.76■□□□□ 0.43
SSBP3-216ENST00000610401 SERPINE3A8MV23 424 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 H0YL77 283 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 TAAR5O14804 337 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 NDUFS6O75380 124 aaKnown RBP17.75■□□□□ 0.43
SSBP3-216ENST00000610401 THBS4P35443 961 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 GLP1RP43220 463 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 ENDOGQ14249 297 aaKnown RBP17.75■□□□□ 0.43
SSBP3-216ENST00000610401 PPA1Q15181 289 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 IGFBP7Q16270 282 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 SOHLH1Q5JUK2 328 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 OPN5Q6U736 354 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 NELFAQ9H3P2 528 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 MOB1AQ9H8S9 216 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 CRLF2Q9HC73 371 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 NKX2-6A6NCS4 301 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 OR2C1O95371 312 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 OR6S1Q8NH40 331 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 IFNA4P05014 189 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 CCL3P10147 92 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 GRB2P62993 217 aaKnown RBP17.75■□□□□ 0.43
SSBP3-216ENST00000610401 C15orf54Q8N8G6 183 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 SUMF2Q8NBJ7 301 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 PLPP5Q8NEB5 264 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 PAPOLGQ9BWT3 736 aaKnown RBP17.75■□□□□ 0.43
SSBP3-216ENST00000610401 TIMM10BQ9Y5J6 103 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 LIPGQ9Y5X9 500 aa17.75■□□□□ 0.43
SSBP3-216ENST00000610401 MT-ND4LP03901 98 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 OR8U8P0C7N1 319 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 NXPH1P58417 271 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 SLC35A1P78382 337 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 CXorf66Q5JRM2 361 aaPredicted RBP17.74■□□□□ 0.43
SSBP3-216ENST00000610401 SYT13Q7L8C5 426 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 ZNF561Q8N587 486 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 FAM89BQ8N5H3 189 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 OR10AD1Q8NGE0 317 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 METTL9Q9H1A3 318 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 BOD1L1Q8NFC6 3051 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 NSG1A0A0A6YYJ2 146 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 A0A1W2PR80 420 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms