RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HACD4Q5VWC8 232 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM45BPQ6NSW5 357 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 MRPL52Q86TS9 123 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 NT5DC3Q86UY8 548 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 OR11L1Q8NGX0 322 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 OR10J6PQ8NGY7 276 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 OR51F2Q8NH61 342 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 OR2AE1Q8NHA4 323 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 PIFOQ8TCI5 191 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 SMIM19Q96E16 107 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF2Q9BSG1 426 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 NDFIP1Q9BT67 221 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 BEX2Q9BXY8 128 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 PCBD2Q9H0N5 130 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 ALX4Q9H161 411 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 BOLA2Q9H3K6 86 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 MFSD1Q9H3U5 465 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 TRABDQ9H4I3 376 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 RPP21Q9H633 154 aaKnown RBP2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 ARMC7Q9H6L4 198 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 RETNQ9HD89 108 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 CYTL1Q9NRR1 136 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 GID8Q9NWU2 228 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 HRASLS2Q9NWW9 162 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 ST3GAL6Q9Y274 331 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF532Q9HCE3 1301 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 MTUS2Q5JR59 1369 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 ABCC11Q96J66 1382 aa2.6□□□□□ -1.99
SMCHD1-213ENST00000609587 IGKV2-28A0A075B6P5 120 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 A0A1B0GVX0 72 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 TSPAN11A1L157 253 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 CXCR6O00574 342 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 MPZL2O60487 215 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 SMIM24O75264 130 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 CLDN11O75508 207 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 AQP8O94778 261 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC25A14O95258 325 aaPredicted RBP2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 RAB36O95755 333 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 IGKV2D-28P01615 120 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 HLA-DPB1P04440 258 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 IFNA16P05015 189 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 BCHEP06276 602 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 RHOCP08134 193 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ACSM4P0C7M7 580 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC2A1P11166 492 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 RAB3BP20337 219 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 F2RP25116 425 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 MPIP34949 423 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 RBM34P42696 430 aaKnown RBP2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ACOT2P49753 483 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ERFP50548 548 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF138P52744 262 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 AP1S2P56377 157 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 CLDN12P56749 244 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 OR4D2P58180 307 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 LINC00315P59091 139 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 FLI1Q01543 452 aaPredicted RBP2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 DYNC1I2Q13409 638 aaKnown RBP2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 TBC1D28Q2M2D7 210 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 CEACAM21Q3KPI0 293 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 PDZD11Q5EBL8 140 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 LPCAT4Q643R3 524 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM71E1Q6IPT2 247 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 MED27Q6P2C8 311 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 DNAJC24Q6P3W2 148 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 CASP12Q6UXS9 341 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 S100A7AQ86SG5 101 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 TRAPPC5Q8IUR0 188 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC30A8Q8IWU4 369 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 METTL13Q8N6R0 699 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 C15orf56Q8N910 161 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 PRELID2Q8N945 189 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 OR2A1Q8NGT9 310 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 OR10X1Q8NGY0 326 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 OR5W2Q8NH69 310 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 TM4SF18Q96CE8 201 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 OR10C1Q96KK4 312 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF488Q96MN9 340 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 Q96MT0 163 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 APOL4Q9BPW4 351 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 AGMATQ9BSE5 352 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ULBP1Q9BZM6 244 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM107BQ9H098 131 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ING2Q9H160 280 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 TMEM38AQ9H6F2 299 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC2A9Q9NRM0 540 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 FAM49BQ9NUQ9 324 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF391Q9UJN7 358 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 ZNF222Q9UK12 451 aa2.59□□□□□ -1.99
SMCHD1-213ENST00000609587 NRCAMQ92823 1304 aa2.59□□□□□ -2
SMCHD1-213ENST00000609587 WDR7Q9Y4E6 1490 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 IGLV4-60A0A075B6I1 120 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 KIR2DS1A0A191URI9 304 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 ZNF98A6NK75 572 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 DISC1C4P0D8 188 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 AZIN1O14977 448 aa2.58□□□□□ -2
SMCHD1-213ENST00000609587 NUPL2O15504 423 aaKnown RBP2.58□□□□□ -2
SMCHD1-213ENST00000609587 CDC40O60508 579 aaKnown RBP eCLIP2.58□□□□□ -2
SMCHD1-213ENST00000609587 HAND1O96004 215 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms