RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 GGNBP1Q5YKI7 109 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 RPUSD3Q6P087 351 aaKnown RBP12.8□□□□□ -0.36
CTCFL-219ENST00000608720 RNASE11Q8TAA1 199 aaKnown RBP12.8□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF799Q96GE5 643 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PHF7Q9BWX1 381 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-219ENST00000608720 METTL9Q9H1A3 318 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 FBXL17Q9UF56 701 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 KCNIP3Q9Y2W7 256 aa12.8□□□□□ -0.36
CTCFL-219ENST00000608720 PHF3Q92576 2039 aaKnown RBP12.79□□□□□ -0.36
CTCFL-219ENST00000608720 C9JQL5 133 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 NPIPA2E9PIF3 369 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 NPIPA3F8WFD2 350 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 RNF224P0DH78 156 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 TMEM225BP0DP42 221 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
CTCFL-219ENST00000608720 UCP2P55851 309 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 SPCS3P61009 180 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 PLXDC2Q6UX71 529 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 LRRC18Q8N456 261 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 AKR1E2Q96JD6 320 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
CTCFL-219ENST00000608720 STARD10Q9Y365 291 aa12.79□□□□□ -0.36
CTCFL-219ENST00000608720 A0A1W2PPH5 198 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 MTCP1P56278 107 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 TMEM33P57088 247 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 SHBQ15464 509 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 KRBOX4Q5JUW0 171 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 LCN10Q6JVE6 187 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 ETV3LQ6ZN32 361 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 UBAC2Q8NBM4 344 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 OR1J1Q8NGS3 322 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 SLAMF9Q96A28 289 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 RBM14Q96PK6 669 aaKnown RBP12.78□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF385AQ96PM9 386 aaKnown RBP12.78□□□□□ -0.36
CTCFL-219ENST00000608720 PRDM13Q9H4Q3 707 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 PLEK2Q9NYT0 353 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 HSF4Q9ULV5 492 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 AMDHD2Q9Y303 409 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 SPAG17Q6Q759 2223 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 TTC28Q96AY4 2481 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 A0A1B0GV90 55 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 CD63P08962 238 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 DTYMKP23919 212 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 S100A2P29034 98 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 Q6ZRG5 221 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 DTX1Q86Y01 620 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 MRPL24Q96A35 216 aaKnown RBP12.78□□□□□ -0.36
CTCFL-219ENST00000608720 RSRP1Q9BUV0 290 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 NECAP2Q9NVZ3 263 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 GAR1Q9NY12 217 aaKnown RBP12.78□□□□□ -0.36
CTCFL-219ENST00000608720 PLA2G2EQ9NZK7 142 aa12.78□□□□□ -0.36
CTCFL-219ENST00000608720 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
CTCFL-219ENST00000608720 IGHV5-10-1A0A0J9YXX1 117 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 E5RGE8 158 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 AGPAT2O15120 278 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 CCL7P80098 99 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 RELQ04864 619 aaPredicted RBP12.77□□□□□ -0.36
CTCFL-219ENST00000608720 PPP1R3BQ86XI6 285 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF565Q8N9K5 539 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 ZNF383Q8NA42 475 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 OR9K2Q8NGE7 335 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 YPEL4Q96NS1 127 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 HDHD3Q9BSH5 251 aaPredicted RBP12.77□□□□□ -0.36
CTCFL-219ENST00000608720 RGCCQ9H4X1 137 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 GPR173Q9NS66 373 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 FAM212BQ9NTI7 297 aaPredicted RBP12.77□□□□□ -0.36
CTCFL-219ENST00000608720 NSG2Q9Y328 171 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 BDP1A6H8Y1 2624 aa12.77□□□□□ -0.36
CTCFL-219ENST00000608720 TERTO14746 1132 aaKnown RBP12.77□□□□□ -0.37
CTCFL-219ENST00000608720 DBHP09172 617 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 SUCLG1P53597 346 aaKnown RBP12.77□□□□□ -0.37
CTCFL-219ENST00000608720 PIGPP57054 158 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 RSU1Q15404 277 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 ADAM5Q6NVV9 412 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 MRPL14Q6P1L8 145 aaKnown RBP12.77□□□□□ -0.37
CTCFL-219ENST00000608720 GUSBP11Q6P575 273 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 C2orf88Q9BSF0 95 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 DUSP23Q9BVJ7 150 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 ARV1Q9H2C2 271 aa12.77□□□□□ -0.37
CTCFL-219ENST00000608720 A0A1B0GWJ7 208 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 hCG_1809904A0A1W2PP81 198 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 A0A1W2PQM1 296 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 A0A1W2PR64 198 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 A0A1W2PRV1 198 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 SNRNP70P08621 437 aaKnown RBP12.76□□□□□ -0.37
CTCFL-219ENST00000608720 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 PAX1P15863 534 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 DSCR4P56555 118 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-219ENST00000608720 NCMAPQ5T1S8 102 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 FAM27BQ5VT28 67 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 MAML2Q8IZL2 1156 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-219ENST00000608720 GALNT14Q96FL9 552 aa12.76□□□□□ -0.37
CTCFL-219ENST00000608720 ULBP2Q9BZM5 246 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms