RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GPR148Q8TDV2 347 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM159Q96B96 161 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 C20orf144Q9BQM9 153 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 CWH43Q9H720 699 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TNFRSF12AQ9NP84 129 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 WRAP73Q9P2S5 460 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ETV7Q9Y603 341 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 UTRNP46939 3433 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TRIP11Q15643 1979 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 FXYD6-FXYD2A0A087WZ82 144 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 FAM183AA6NL82 134 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZAR1LA6NP61 321 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SRRM4A7MD48 611 aaKnown RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 RNF212BA8MTL3 300 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR11H12B2RN74 326 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SYT7O43581 403 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SCGNO76038 276 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 NDUFB8O95169 186 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 AIFM1O95831 613 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OXTP01178 125 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SULT1A1P50225 295 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 XGP55808 180 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SNRPFP62306 86 aaKnown RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 RHOGP84095 191 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM132DQ14C87 1099 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TGIF1Q15583 401 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 MAPK14Q16539 360 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 PLPPR5Q32ZL2 321 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF542PQ5EBM4 170 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 GFI1BQ5VTD9 330 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF585AQ6P3V2 769 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF474Q6S9Z5 364 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SMARCD3Q6STE5 483 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 CD300LDQ6UXZ3 194 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 UEVLDQ8IX04 471 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM183AQ8IXX5 376 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 IZUMO1Q8IYV9 350 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 KCNRGQ8N5I3 272 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ARIH2OSQ8N7S6 290 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ACVR1CQ8NER5 493 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 NFAM1Q8NET5 270 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR11H1Q8NG94 326 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR56A1Q8NGH5 318 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR11H2Q8NH07 326 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC7A13Q8TCU3 470 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 KCTD7Q96MP8 289 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 FXYD6Q9H0Q3 95 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ELOVL5Q9NYP7 299 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 VPS29Q9UBQ0 182 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR1A2Q9Y585 309 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 COX11Q9Y6N1 276 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 LOC102724200A0A096LPH7 203 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 MLNRO43193 412 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 IGSF6O95976 241 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 CD14P08571 375 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 PPIAL4GP0DN37 164 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SRD5A1P18405 259 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 GDF1P27539 372 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 MIPP30301 263 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR3A2P47893 321 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 CRISP3P54108 245 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ST3GAL4Q11206 333 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2F1Q13607 317 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ELAVL1Q15717 326 aaKnown RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZSWIM7Q19AV6 140 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 CD300EQ496F6 205 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 C19orf54Q5BKX5 351 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ALG10BQ5I7T1 473 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TCTEX1D4Q5JR98 221 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 KIAA0895LQ68EN5 471 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR4A47Q6IF82 309 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 C12orf54Q6X4T0 127 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 Q6ZTK2 550 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM179BQ7Z7N9 219 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC16A11Q8NCK7 471 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 PLPPR1Q8TBJ4 325 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 DNASE2BQ8WZ79 361 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 OR4K3Q96R72 315 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 MS4A8Q9BY19 250 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 GABARAPL3Q9BY60 117 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 MEGF9Q9H1U4 602 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 FGF20Q9NP95 211 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 TXNL4BQ9NX01 149 aaKnown RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 B4GALT7Q9UBV7 327 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF107Q9UII5 783 aaPredicted RBP4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 PILRBQ9UKJ0 227 aa4.35□□□□□ -1.71
SPTBN1-206ENST00000602898 PSMB11A5LHX3 300 aa4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 GGT3PA6NGU5 568 aa4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 LILRA5A6NI73 299 aa4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 PPP5D1E7EU14 171 aa4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 CREBL2O60519 120 aaPredicted RBP4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 LSM8O95777 96 aaKnown RBP4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 IL5P05113 134 aa4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 PIPP12273 146 aaPredicted RBP4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 PRKACGP22612 351 aa4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 FGF9P31371 208 aaPredicted RBP4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 CSRP3P50461 194 aa4.34□□□□□ -1.71
SPTBN1-206ENST00000602898 RIPPLY3P57055 190 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms