RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 GDPD3Q7L5L3 318 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 SSX6Q7RTT6 188 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 Q8N2B8 174 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 YIPF7Q8N8F6 280 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 OR11H6Q8NGC7 330 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 TMEM163Q8TC26 289 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 RPS4Y2Q8TD47 263 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 UTP4Q969X6 686 aaKnown RBP10.62□□□□□ -0.71
RPS28-204ENST00000602140 CEP19Q96LK0 163 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 TBX5Q99593 518 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 CDCA4Q9BXL8 241 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 CADM1Q9BY67 442 aaKnown RBP10.62□□□□□ -0.71
RPS28-204ENST00000602140 PLEKHA1Q9HB21 404 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 KRT84Q9NSB2 600 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 MTCH1Q9NZJ7 389 aa10.62□□□□□ -0.71
RPS28-204ENST00000602140 IGKV1-27A0A075B6S5 117 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 ZAR1LA6NP61 321 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 SYT7O43581 403 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 RBP4P02753 201 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 KRT8P05787 483 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 IGHV1-8P0DP01 117 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 CCL1P22362 96 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 EMX1Q04741 257 aaPredicted RBP10.61□□□□□ -0.71
RPS28-204ENST00000602140 CNN3Q15417 329 aaKnown RBP10.61□□□□□ -0.71
RPS28-204ENST00000602140 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 C12orf73Q69YU5 71 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 OR8H2Q8N162 312 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 SLAMF9Q96A28 289 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 OR5M11Q96RB7 305 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 PRSS22Q9GZN4 317 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 MMP28Q9H239 520 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 PITPNC1Q9UKF7 332 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 PLXNB1O43157 2135 aa10.61□□□□□ -0.71
RPS28-204ENST00000602140 G3V2T6 193 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 XPNPEP2O43895 674 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 PEX14O75381 377 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 DNAJC8O75937 253 aaPredicted RBP10.6□□□□□ -0.71
RPS28-204ENST00000602140 JUNBP17275 347 aaPredicted RBP10.6□□□□□ -0.71
RPS28-204ENST00000602140 OR12D2P58182 307 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 MEF2CQ06413 473 aaPredicted RBP10.6□□□□□ -0.71
RPS28-204ENST00000602140 EDDM3AQ14507 147 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 ARSJQ5FYB0 599 aaPredicted RBP10.6□□□□□ -0.71
RPS28-204ENST00000602140 Q6ZPA2 131 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 Q6ZS46 218 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 SLC25A26Q70HW3 274 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 TCF23Q7RTU1 214 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 REC114Q7Z4M0 266 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 CATSPERDQ86XM0 798 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 NDUFA11Q86Y39 141 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 EGFL6Q8IUX8 553 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 GID4Q8IVV7 300 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 OR4S1Q8NGB4 309 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 SLC7A6OSQ96CW6 309 aaPredicted RBP10.6□□□□□ -0.71
RPS28-204ENST00000602140 R3HDM4Q96D70 268 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 SNX22Q96L94 193 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 ZNF714Q96N38 554 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 CITED2Q99967 270 aaPredicted RBP10.6□□□□□ -0.71
RPS28-204ENST00000602140 HILPDAQ9Y5L2 63 aa10.6□□□□□ -0.71
RPS28-204ENST00000602140 A0A1W2PQL4 384 aaPredicted RBP10.59□□□□□ -0.71
RPS28-204ENST00000602140 hADV38S2A0JD32 116 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 TMEM82A0PJX8 343 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 METTL15A6NJ78 407 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 GATBO75879 557 aaKnown RBP10.59□□□□□ -0.71
RPS28-204ENST00000602140 APOL3O95236 402 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 FUT6P51993 359 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 ACTA2P62736 377 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 BLCAPP62952 87 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 ACTG2P63267 376 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 ACTC1P68032 377 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 ACTA1P68133 377 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 SLC34A1Q06495 639 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 KDM4DQ6B0I6 523 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 ZNF676Q8N7Q3 588 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 TPRX1Q8N7U7 411 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 NDNFQ8TB73 568 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 WIPF2Q8TF74 440 aaPredicted RBP10.59□□□□□ -0.71
RPS28-204ENST00000602140 EMG1Q92979 244 aaKnown RBP10.59□□□□□ -0.71
RPS28-204ENST00000602140 BORCS8Q96FH0 119 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 ADI1Q9BV57 179 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 WNT10AQ9GZT5 417 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 CHST6Q9GZX3 395 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 IL36RNQ9UBH0 155 aa10.59□□□□□ -0.71
RPS28-204ENST00000602140 WARS2Q9UGM6 360 aaKnown RBP10.59□□□□□ -0.71
RPS28-204ENST00000602140 ADARB2-AS1A8MUL3 147 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 F2RL2O00254 374 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 PIN1P1O15428 100 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 HAND1O96004 215 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 SERPINA3P01011 423 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 IGHA1P01876 353 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 OR2T7P0C7T2 308 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 GABRR1P24046 479 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 DYNLT3P51808 116 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 GRK1Q15835 563 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 ATP6AP1Q15904 470 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 MINOS1Q5TGZ0 78 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 ZDHHC13Q8IUH4 622 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 OR4F17Q8NGA8 305 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 OR52N4Q8NGI2 321 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 SGCDQ92629 289 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 OR4F4Q96R69 305 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms