RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 SULT1B1O43704 296 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 ZNF737O75373 536 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 ATP6V1G2O95670 118 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 BCL3P20749 454 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 PRKACBP22694 351 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 MYF6P23409 242 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 PRDX2P32119 198 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 POU3F4P49335 361 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 ATP1B3P54709 279 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 MTCP1P56278 107 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 ARF6P62330 175 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 ZDHHC22Q8N966 263 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 DMRTB1Q96MA1 342 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 PCGF1Q9BSM1 259 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 CNTD2Q9H8S5 307 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 RBFOX1Q9NWB1 397 aaKnown RBP12.96□□□□□ -0.33
RPS28-203ENST00000600659 DHDHQ9UQ10 334 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 LSM2Q9Y333 95 aaKnown RBP12.96□□□□□ -0.33
RPS28-203ENST00000600659 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 KPTNQ9Y664 436 aa12.96□□□□□ -0.33
RPS28-203ENST00000600659 CENPVL3A0A0U1RRI6 287 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 ANGPTL7O43827 346 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 TOX4O94842 621 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 INMTO95050 263 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 CDK1P06493 297 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 SOX2P48431 317 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 DLX1P56177 255 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 SLC35A2P78381 396 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 PDZK1IP1Q13113 114 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 SCGB2A2Q13296 93 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 RNLSQ5VYX0 342 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 IZUMO2Q6UXV1 221 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 BRD3OSQ6XYD6 125 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 SERPINA12Q8IW75 414 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 NANOGP1Q8N7R0 232 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 TMEM185AQ8NFB2 350 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 GPR148Q8TDV2 347 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 TSEN15Q8WW01 171 aaKnown RBP12.95□□□□□ -0.34
RPS28-203ENST00000600659 ORAI1Q96D31 301 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 C19orf12Q9NSK7 152 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 TAS2R4Q9NYW5 299 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 ZNF281Q9Y2X9 895 aa12.95□□□□□ -0.34
RPS28-203ENST00000600659 RPSAP08865 295 aaKnown RBP12.94□□□□□ -0.34
RPS28-203ENST00000600659 WNT4P56705 351 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 IRF3Q14653 427 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 METTL11BQ5VVY1 283 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 RUSC1-AS1Q66K80 236 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 STX19Q8N4C7 294 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 BPIFB2Q8N4F0 458 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 KIR3DL3Q8N743 410 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 SIGLECL1Q8N7X8 197 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 OR5D18Q8NGL1 313 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 ZNF418Q8TF45 676 aaPredicted RBP12.94□□□□□ -0.34
RPS28-203ENST00000600659 TMEM158Q8WZ71 300 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 H1FXQ92522 213 aaKnown RBP12.94□□□□□ -0.34
RPS28-203ENST00000600659 GHSRQ92847 366 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 TNFRSF14Q92956 283 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 C19orf24Q9BVV8 132 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 SUCNR1Q9BXA5 334 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 OR14J1Q9UGF5 321 aa12.94□□□□□ -0.34
RPS28-203ENST00000600659 MDFIC2A0A1B0GVS7 189 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 TMEM82A0PJX8 343 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 H0YHG0 523 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 KDM4BO94953 1096 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 TK1P04183 234 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 NDUFB7P17568 137 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 IGFBP3P17936 291 aaPredicted RBP12.93□□□□□ -0.34
RPS28-203ENST00000600659 COL10A1Q03692 680 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 PRB3Q04118 309 aaPredicted RBP12.93□□□□□ -0.34
RPS28-203ENST00000600659 ZNF146Q15072 292 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 KISS1Q15726 138 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 C17orf107Q6ZR85 190 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 VMO1Q7Z5L0 202 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 MKXQ8IYA7 352 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 C11orf42Q8N5U0 333 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.93□□□□□ -0.34
RPS28-203ENST00000600659 OR5D14Q8NGL3 314 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
RPS28-203ENST00000600659 TMEM106AQ96A25 262 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 NKX3-1Q99801 234 aaPredicted RBP12.93□□□□□ -0.34
RPS28-203ENST00000600659 CDCA4Q9BXL8 241 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 PRDM13Q9H4Q3 707 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 DUSP21Q9H596 190 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 SEBOXQ9HB31 216 aaPredicted RBP12.93□□□□□ -0.34
RPS28-203ENST00000600659 CHCHD3Q9NX63 227 aaKnown RBP12.93□□□□□ -0.34
RPS28-203ENST00000600659 KIAA2026Q5HYC2 2103 aa12.93□□□□□ -0.34
RPS28-203ENST00000600659 TRBV5-7A0A0A0MS05 114 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 TRBV23-1A0A0A0MS06 115 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 MAGEA13PA6NCF6 341 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 K7N7A8 449 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 GABRPO00591 440 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 CD1AP06126 327 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 CALCBP10092 127 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 FPR2P25090 351 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 MED21Q13503 144 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 HCP5Q6MZN7 132 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 METAP1DQ6UB28 335 aaPredicted RBP12.92□□□□□ -0.34
RPS28-203ENST00000600659 TCF23Q7RTU1 214 aa12.92□□□□□ -0.34
RPS28-203ENST00000600659 Q8IYB0 196 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms