RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 SEH1LQ96EE3 360 aa10.83□□□□□ -0.68
SRRM1-223ENST00000600523 ZNF488Q96MN9 340 aa10.83□□□□□ -0.68
SRRM1-223ENST00000600523 SPACA5Q96QH8 159 aa10.83□□□□□ -0.68
SRRM1-223ENST00000600523 VCX3AQ9NNX9 186 aa10.83□□□□□ -0.68
SRRM1-223ENST00000600523 MTCH1Q9NZJ7 389 aa10.83□□□□□ -0.68
SRRM1-223ENST00000600523 AUP1Q9Y679 476 aa10.83□□□□□ -0.68
SRRM1-223ENST00000600523 TEP1Q99973 2627 aaKnown RBP10.83□□□□□ -0.68
SRRM1-223ENST00000600523 IGHV2-70DA0A0C4DH43 119 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 A0A1W2PPK0 400 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 KIAA1324LA8MWY0 1029 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-223ENST00000600523 TNFRSF13BO14836 293 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-223ENST00000600523 SIGLEC5O15389 551 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 SPRY1O43609 319 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-223ENST00000600523 GPX5O75715 221 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 ARL6IP5O75915 188 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 CSTBP04080 98 aaKnown RBP10.82□□□□□ -0.68
SRRM1-223ENST00000600523 CHRM2P08172 466 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 FAM157CP0CG43 387 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 CPEP16870 476 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 RANBP1P43487 201 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 MAP2K4P45985 399 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 ERVK11-1P61568 191 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 TPBGQ13641 420 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 ZNF529Q6P280 563 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 ZNF841Q6ZN19 808 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 BTN2A1Q7KYR7 527 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 CEACAM19Q7Z692 300 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 CDH26Q8IXH8 852 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 TBC1D15Q8TC07 691 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 PHYHIPQ92561 330 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 SDSLQ96GA7 329 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 DMRTB1Q96MA1 342 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 DERL3Q96Q80 235 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 HES4Q9HCC6 221 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 ACOT13Q9NPJ3 140 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 CTSZQ9UBR2 303 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 INSIG2Q9Y5U4 225 aa10.82□□□□□ -0.68
SRRM1-223ENST00000600523 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.81□□□□□ -0.684e-9■■■■■ 34.7
SRRM1-223ENST00000600523 YLPM1P49750 1951 aaKnown RBP10.81□□□□□ -0.68
SRRM1-223ENST00000600523 IGKV1D-17A0A075B6S4 117 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 TRBV5-7A0A0A0MS05 114 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 KIR2DS1A0A191URI9 304 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 A0A1W2PQ09 198 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 SH2D1BO14796 132 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 ANGPTL7O43827 346 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 ZNF780AO75290 641 aaPredicted RBP10.81□□□□□ -0.68
SRRM1-223ENST00000600523 TNFAIP8O95379 198 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 PRKACAP17612 351 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 BCL3P20749 454 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 MTNR1BP49286 362 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 CAV3P56539 151 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 RPS11P62280 158 aaKnown RBP eCLIP10.81□□□□□ -0.68
SRRM1-223ENST00000600523 EMX1Q04741 257 aaPredicted RBP10.81□□□□□ -0.68
SRRM1-223ENST00000600523 BLMHQ13867 455 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 GPR176Q14439 515 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 KCTD21Q4G0X4 260 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 HSD17B12Q53GQ0 312 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 ARMCX4Q5H9R4 360 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 METTL11BQ5VVY1 283 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 ZNF773Q6PK81 442 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 BATF2Q8N1L9 274 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 JAGN1Q8N5M9 183 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 ASCC1Q8N9N2 400 aaKnown RBP10.81□□□□□ -0.68
SRRM1-223ENST00000600523 PXT1Q8NFP0 134 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 OR52N4Q8NGI2 321 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 OR51A2Q8NGJ7 313 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 OR5D13Q8NGL4 314 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 FOXRED1Q96CU9 486 aaPredicted RBP10.81□□□□□ -0.68
SRRM1-223ENST00000600523 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 FAM234AQ9H0X4 552 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 NOX4Q9NPH5 578 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 MMP26Q9NRE1 261 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 ZNF469Q96JG9 3925 aaPredicted RBP10.81□□□□□ -0.68
SRRM1-223ENST00000600523 MTORP42345 2549 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 TLN2Q9Y4G6 2542 aa10.81□□□□□ -0.68
SRRM1-223ENST00000600523 TRBV23-1A0A0A0MS06 115 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 hCG_1809904A0A1W2PP81 198 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 A0A1W2PPE2 198 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 A0A1W2PR64 198 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 A0A1W2PRV1 198 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 RGS9O75916 674 aaPredicted RBP10.8□□□□□ -0.68
SRRM1-223ENST00000600523 KDM4BO94953 1096 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 MAS1P04201 325 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 IGFBP3P17936 291 aaPredicted RBP10.8□□□□□ -0.68
SRRM1-223ENST00000600523 PSMB9P28065 219 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 GABRA5P31644 462 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 PTGFRP43088 359 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 GLT8D1Q68CQ7 371 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 GDPD3Q7L5L3 318 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 SPARTQ8N0X7 666 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 ZNRF1Q8ND25 227 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 TMEM203Q969S6 136 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 METTL9Q9H1A3 318 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 CNTD2Q9H8S5 307 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 HMG20AQ9NP66 347 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 EXOSC4Q9NPD3 245 aaKnown RBP10.8□□□□□ -0.68
SRRM1-223ENST00000600523 RBFOX1Q9NWB1 397 aaKnown RBP10.8□□□□□ -0.68
SRRM1-223ENST00000600523 METRNQ9UJH8 293 aa10.8□□□□□ -0.68
SRRM1-223ENST00000600523 RPUSD1Q9UJJ7 312 aaKnown RBP10.8□□□□□ -0.68
SRRM1-223ENST00000600523 ING4Q9UNL4 249 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms