RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 FAM90A20PA6NIJ5 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 A6NIN4 97 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A9PA6NNJ1 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A12PA8MX19 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A5PA8MXJ8 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 PRR23D1E9PI22 279 aaPredicted RBP4.84□□□□□ -1.63
VRK3-220ENST00000600259 MAGEB4O15481 346 aaPredicted RBP4.84□□□□□ -1.63
VRK3-220ENST00000600259 GSC2O15499 205 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 PRODHO43272 600 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 PSPNO60542 156 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 PEX14O75381 377 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 ZNF254O75437 659 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 E2F6O75461 281 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 DHRS3O75911 302 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 OR2F2O95006 317 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 IGHA1P01876 353 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A15PP0C7V4 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A13PP0C7W8 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A14PP0C7W9 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 FAM90A24PP0C7X0 464 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 PRR23D2P0DMB1 279 aaPredicted RBP4.84□□□□□ -1.63
VRK3-220ENST00000600259 HTR1DP28221 377 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 CD34P28906 385 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 GDNFP39905 211 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 EDDM3BP56851 147 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 MS4A2Q01362 244 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 BDH1Q02338 343 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 DYNC1I2Q13409 638 aaKnown RBP4.84□□□□□ -1.63
VRK3-220ENST00000600259 UBE2V2Q15819 145 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 SPATS1Q496A3 300 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 ABCA11PQ4W5N1 156 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 SLC35D3Q5M8T2 416 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 CLVS2Q5SYC1 327 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 ZNF684Q5T5D7 378 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 CYP2R1Q6VVX0 501 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 ASRGL1Q7L266 308 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 RNF144BQ7Z419 303 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 ZNF679Q8IYX0 411 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 ELMOD2Q8IZ81 293 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 TPRX1Q8N7U7 411 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 OR10G2Q8NGC3 310 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 CORO2AQ92828 525 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 OTULINQ96BN8 352 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 ZNF714Q96N38 554 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 RBM14Q96PK6 669 aaKnown RBP4.84□□□□□ -1.63
VRK3-220ENST00000600259 SLC25A33Q9BSK2 321 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 CLEC7AQ9BXN2 247 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 TMEM133Q9H2Q1 129 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 MAGIXQ9H6Y5 334 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 IL36RNQ9UBH0 155 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 POLDIP2Q9Y2S7 368 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 SAMHD1Q9Y3Z3 626 aaKnown RBP4.84□□□□□ -1.63
VRK3-220ENST00000600259 LINC00312Q9Y6C7 94 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 U3KQK5 164 aa4.84□□□□□ -1.63
VRK3-220ENST00000600259 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
VRK3-220ENST00000600259 hADV38S2A0JD32 116 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ARRDC5A6NEK1 342 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 E9PQ18 207 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 H0YHG0 523 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 C3orf84H3BNL1 204 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 SNX3O60493 162 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 HMGN1P05114 100 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 SNRNP70P08621 437 aaKnown RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 CCDC159P0C7I6 412 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 CGB3P0DN86 165 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 CGB7P0DN87 165 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 CCL1P22362 96 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ERP29P30040 261 aaKnown RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 MYCNOSP40205 109 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 NPBWR2P48146 333 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 RPL23AP62750 156 aaKnown RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 EFNB1P98172 346 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ZNF91Q05481 1191 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 APOFQ13790 326 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ARSJQ5FYB0 599 aaPredicted RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 TMEM236Q5W0B7 351 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 KCTD18Q6PI47 426 aaPredicted RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 GDPD3Q7L5L3 318 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 OR2W3Q7Z3T1 314 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ZNF329Q86UD4 541 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 DEFB107AQ8IZN7 70 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ABHD12Q8N2K0 398 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 OSR2Q8N2R0 312 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ZNF676Q8N7Q3 588 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ASCC1Q8N9N2 400 aaKnown RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 OR4X2Q8NGF9 303 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 NDNFQ8TB73 568 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 TEX47Q8TBZ9 253 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 GIPC3Q8TF64 312 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 APOL4Q9BPW4 351 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 CHID1Q9BWS9 393 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 CADM1Q9BY67 442 aaKnown RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 MROQ9BYG7 248 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 GPR61Q9BZJ8 451 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 REEP1Q9H902 201 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 MRM2Q9UI43 246 aaKnown RBP4.83□□□□□ -1.64
VRK3-220ENST00000600259 LAMP5Q9UJQ1 280 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 DSCAML1Q8TD84 2053 aa4.83□□□□□ -1.64
VRK3-220ENST00000600259 A0A087X0M5 115 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms