RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 FAM157CP0CG43 387 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 TMEM225BP0DP42 221 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 BCL3P20749 454 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 PTGFRP43088 359 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 RPL5P46777 297 aaKnown RBP15.74■□□□□ 0.11
CCDC9-205ENST00000600117 NPBWR2P48146 333 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 LOXL1Q08397 574 aaPredicted RBP15.74■□□□□ 0.11
CCDC9-205ENST00000600117 C1orf100Q5SVJ3 147 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 ACP7Q6ZNF0 438 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 MUC20Q8N307 709 aaPredicted RBP15.74■□□□□ 0.11
CCDC9-205ENST00000600117 OR4D6Q8NGJ1 314 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 NARFLQ9H6Q4 476 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 RASL12Q9NYN1 266 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 GSTK1Q9Y2Q3 226 aa15.74■□□□□ 0.11
CCDC9-205ENST00000600117 AK6Q9Y3D8 172 aaKnown RBP15.74■□□□□ 0.11
CCDC9-205ENST00000600117 A8MV72 311 aaPredicted RBP15.73■□□□□ 0.11
CCDC9-205ENST00000600117 CYB5AP00167 134 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 MUC1P15941 1255 aaPredicted RBP15.73■□□□□ 0.11
CCDC9-205ENST00000600117 AMY2BP19961 511 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 USF1P22415 310 aaPredicted RBP15.73■□□□□ 0.11
CCDC9-205ENST00000600117 MYL9P24844 172 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 LMO4P61968 165 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 GLT8D1Q68CQ7 371 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 STUMQ69YW2 141 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 FAM166AQ6J272 317 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 SLC16A12Q6ZSM3 486 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 GPR141Q7Z602 305 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 UQCC2Q9BRT2 126 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 NAA50Q9GZZ1 169 aaKnown RBP15.73■□□□□ 0.11
CCDC9-205ENST00000600117 SMURF1Q9HCE7 757 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 RBFOX1Q9NWB1 397 aaKnown RBP15.73■□□□□ 0.11
CCDC9-205ENST00000600117 NLKQ9UBE8 527 aa15.73■□□□□ 0.11
CCDC9-205ENST00000600117 TRAV38-1A0A0B4J264 116 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 CEACAM18A8MTB9 384 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 F5H0A9 414 aaPredicted RBP15.72■□□□□ 0.11
CCDC9-205ENST00000600117 TRAPPC2LH3BP13 241 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 NXPH2O95156 264 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 CDRT1O95170 752 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 SFTPBP07988 381 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 MTNR1BP49286 362 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 OR10A3P58181 314 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 KRTAP24-1Q3LI83 254 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 LYPD2Q6UXB3 125 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 NR2C2APQ86WQ0 139 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 ANKRD13BQ86YJ7 626 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 Q8IYB0 196 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 SPICQ8N5J4 248 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 PNLDC1Q8NA58 520 aaKnown RBP15.72■□□□□ 0.11
CCDC9-205ENST00000600117 Q8NFD4 153 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 C12orf43Q96C57 262 aaKnown RBP15.72■□□□□ 0.11
CCDC9-205ENST00000600117 FOXRED1Q96CU9 486 aaPredicted RBP15.72■□□□□ 0.11
CCDC9-205ENST00000600117 C1orf147Q96MC9 270 aaPredicted RBP15.72■□□□□ 0.11
CCDC9-205ENST00000600117 KCTD7Q96MP8 289 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 GAL3ST1Q99999 423 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 FAM192AQ9GZU8 254 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 DNAJB11Q9UBS4 358 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 ZNF222Q9UK12 451 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 MRPS28Q9Y2Q9 187 aaKnown RBP15.72■□□□□ 0.11
CCDC9-205ENST00000600117 MEGF8Q7Z7M0 2845 aa15.72■□□□□ 0.11
CCDC9-205ENST00000600117 A0A0G2JK05 382 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 SLC22A1O15245 554 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 IGHV2-5P01817 119 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 GYPAP02724 150 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 PSG2P11465 335 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 IL2RGP31785 369 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 TGFBR1P36897 503 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 LSM3P62310 102 aaKnown RBP15.71■□□□□ 0.11
CCDC9-205ENST00000600117 MICBQ29980 383 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 SMIM21Q3B7S5 101 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 GPR107Q5VW38 600 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 ELP2Q6IA86 826 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 DCDC5Q6ZRR9 648 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 FAM58AQ8N1B3 248 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 OR5T2Q8NGG2 359 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 ANGPTL6Q8NI99 470 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 EMG1Q92979 244 aaKnown RBP15.71■□□□□ 0.11
CCDC9-205ENST00000600117 PATZ1Q9HBE1 687 aaKnown RBP15.71■□□□□ 0.11
CCDC9-205ENST00000600117 RHOFQ9HBH0 211 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 HMG20AQ9NP66 347 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 IL36GQ9NZH8 169 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 IL36RNQ9UBH0 155 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 V9GY05 133 aa15.71■□□□□ 0.11
CCDC9-205ENST00000600117 YLPM1P49750 1951 aaKnown RBP15.7■□□□□ 0.1
CCDC9-205ENST00000600117 IGKV1D-17A0A075B6S4 117 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 OR2AT4A6NND4 320 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 SLC17A2O00624 439 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 PDCD5O14737 125 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 GABARAPO95166 117 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 TFF1P04155 84 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 CLEC2LP0C7M8 214 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 CALCBP10092 127 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 RAB3BP20337 219 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 SDC2P34741 201 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 KCNJ8Q15842 424 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 ATPAF1Q5TC12 328 aaPredicted RBP15.7■□□□□ 0.1
CCDC9-205ENST00000600117 GLIPR1L1Q6UWM5 242 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 OR6M1Q8NGM8 313 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 OR10K1Q8NGX5 313 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 TBC1D15Q8TC07 691 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 SLC25A28Q96A46 364 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms