RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ACTG2P63267 376 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 RIPPLY1Q0D2K3 151 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 ST3GAL4Q11206 333 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 MIDNQ504T8 468 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 PLCXD3Q63HM9 321 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 XAF1Q6GPH4 301 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 KRT74Q7RTS7 529 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 TMEM185AQ8NFB2 350 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 PSORS1C1Q9UIG5 152 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 V9GYS6 101 aa15.34■□□□□ 0.05
PNKP-213ENST00000599543 SYT7O43581 403 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 CLPXO76031 633 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 PSG2P11465 335 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 VHLP40337 213 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 UBE2E1P51965 193 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 C6orf141Q5SZD1 244 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 HAGHLQ6PII5 290 aaPredicted RBP15.33■□□□□ 0.04
PNKP-213ENST00000599543 Q6ZSV7 163 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 KCTD20Q7Z5Y7 419 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 PNKDQ8N490 385 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 ZSCAN4Q8NAM6 433 aaPredicted RBP15.33■□□□□ 0.04
PNKP-213ENST00000599543 ZNRF1Q8ND25 227 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 OR5A2Q8NGI9 324 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 OR5R1Q8NH85 324 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 AQP3Q92482 292 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 TNFRSF14Q92956 283 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 MRPL48Q96GC5 212 aaKnown RBP15.33■□□□□ 0.04
PNKP-213ENST00000599543 TMEM80Q96HE8 168 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 CNBD2Q96M20 576 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 ELL3Q9HB65 397 aaPredicted RBP15.33■□□□□ 0.04
PNKP-213ENST00000599543 INPP5EQ9NRR6 644 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 ENPP5Q9UJA9 477 aa15.33■□□□□ 0.04
PNKP-213ENST00000599543 DIMT1Q9UNQ2 313 aaKnown RBP15.33■□□□□ 0.04
PNKP-213ENST00000599543 TRBV23-1A0A0A0MS06 115 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 MTRF1O75570 445 aaKnown RBP15.32■□□□□ 0.04
PNKP-213ENST00000599543 DCKP27707 260 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 CAPZA1P52907 286 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 PROK1P58294 105 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 KRTAP10-3P60369 221 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 ACSM1Q08AH1 577 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 ALKBH1Q13686 389 aaKnown RBP15.32■□□□□ 0.04
PNKP-213ENST00000599543 DOC2BQ14184 412 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 SMIM21Q3B7S5 101 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 PDLIM3Q53GG5 364 aaPredicted RBP15.32■□□□□ 0.04
PNKP-213ENST00000599543 ZBTB37Q5TC79 503 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 FAM185AQ8N0U4 392 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 SYS1Q8N2H4 156 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 STX19Q8N4C7 294 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 OR5D13Q8NGL4 314 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 MMP27Q9H306 513 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 TCF7L1Q9HCS4 588 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 RASL12Q9NYN1 266 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 ZNF222Q9UK12 451 aa15.32■□□□□ 0.04
PNKP-213ENST00000599543 EFCAB10A6NFE3 127 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 ANKRD61A6NGH8 418 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 OR4C45A6NMZ5 311 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 PTGES3LE9PB15 166 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 SLC1A7O00341 560 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 LALBAP00709 142 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 NRASP01111 189 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 MYL12AP19105 171 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 CCL1P22362 96 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 MYF6P23409 242 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 C21orf33P30042 268 aaPredicted RBP15.31■□□□□ 0.04
PNKP-213ENST00000599543 TGFBR2P37173 567 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 GBX2P52951 348 aaPredicted RBP15.31■□□□□ 0.04
PNKP-213ENST00000599543 FDX2Q6P4F2 183 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 ZNF676Q8N7Q3 588 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 ZFP41Q8N8Y5 198 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 OR51A4Q8NGJ6 313 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 TRMT10AQ8TBZ6 339 aaKnown RBP15.31■□□□□ 0.04
PNKP-213ENST00000599543 JAM3Q9BX67 310 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 C16orf95Q9H693 158 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 PLEKHA1Q9HB21 404 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 PAK1IP1Q9NWT1 392 aaPredicted RBP15.31■□□□□ 0.04
PNKP-213ENST00000599543 EXOSC1Q9Y3B2 195 aaKnown RBP15.31■□□□□ 0.04
PNKP-213ENST00000599543 SF3B6Q9Y3B4 125 aaKnown RBP15.31■□□□□ 0.04
PNKP-213ENST00000599543 MAB21L2Q9Y586 359 aa15.31■□□□□ 0.04
PNKP-213ENST00000599543 SIRT4Q9Y6E7 314 aaPredicted RBP15.31■□□□□ 0.04
PNKP-213ENST00000599543 IRGMA1A4Y4 181 aa15.3■□□□□ 0.04
PNKP-213ENST00000599543 UBCP0CG48 685 aaKnown RBP15.3■□□□□ 0.04
PNKP-213ENST00000599543 ASPHD2Q6ICH7 369 aa15.3■□□□□ 0.04
PNKP-213ENST00000599543 ACP7Q6ZNF0 438 aa15.3■□□□□ 0.04
PNKP-213ENST00000599543 SDSLQ96GA7 329 aa15.3■□□□□ 0.04
PNKP-213ENST00000599543 PDCD1LG2Q9BQ51 273 aa15.3■□□□□ 0.04
PNKP-213ENST00000599543 ANKRD60Q9BZ19 345 aa15.3■□□□□ 0.04
PNKP-213ENST00000599543 PLCXD1Q9NUJ7 323 aa15.3■□□□□ 0.04
PNKP-213ENST00000599543 TET2Q6N021 2002 aaPredicted RBP15.29■□□□□ 0.04
PNKP-213ENST00000599543 PNMA8CA0A1B0GUJ8 204 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 A0A1W2PPH5 198 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 ANGPTL7O43827 346 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 TSPAN9O75954 239 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 PIPP12273 146 aaPredicted RBP15.29■□□□□ 0.04
PNKP-213ENST00000599543 HAAOP46952 286 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 CLVS2Q5SYC1 327 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 TMPRSS11AQ6ZMR5 421 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 ZNF573Q86YE8 665 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 BATF2Q8N1L9 274 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 ZNF561Q8N587 486 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 POC1AQ8NBT0 407 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms