RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 OCM2P0CE71 109 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 OCMP0CE72 109 aaPredicted RBP7.95□□□□□ -1.14
VRK3-216ENST00000599342 ZNF728P0DKX0 622 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 KIR2DS4P43632 304 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 EFNB2P52799 333 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 DYNC1I2Q13409 638 aaKnown RBP7.95□□□□□ -1.14
VRK3-216ENST00000599342 TMED1Q13445 227 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 EDDM3AQ14507 147 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 UBE2V2Q15819 145 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 PLA1AQ53H76 456 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 SLC25A26Q70HW3 274 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 Q8IYB0 196 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 OR8H2Q8N162 312 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 C11orf42Q8N5U0 333 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 KLHDC1Q8N7A1 406 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 EMG1Q92979 244 aaKnown RBP7.95□□□□□ -1.14
VRK3-216ENST00000599342 AJUBAQ96IF1 538 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 ZNF714Q96N38 554 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 IMPAD1Q9NX62 359 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 MTCH1Q9NZJ7 389 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 PITPNC1Q9UKF7 332 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 OAZ3Q9UMX2 235 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 SIGLEC9Q9Y336 463 aa7.95□□□□□ -1.14
VRK3-216ENST00000599342 TBL2Q9Y4P3 447 aaKnown RBP7.95□□□□□ -1.14
VRK3-216ENST00000599342 IGKV1-27A0A075B6S5 117 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 hADV38S2A0JD32 116 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 MEX3AA1L020 520 aaKnown RBP7.94□□□□□ -1.14
VRK3-216ENST00000599342 SAC3D1A6NKF1 404 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 VGLL3A8MV65 326 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 CHST1O43916 411 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 ZNF737O75373 536 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 HAND1O96004 215 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 IGHV1-8P0DP01 117 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 VSIG10L2P0DP72 767 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 ZNF20P17024 532 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 GABRR1P24046 479 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 PEX2P28328 305 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 POLR2IP36954 125 aaKnown RBP7.94□□□□□ -1.14
VRK3-216ENST00000599342 POU3F4P49335 361 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 RBP2P50120 134 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 ATP1B3P54709 279 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 DLX6P56179 175 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 OR12D2P58182 307 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 FAM189A2Q15884 450 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 TP53I3Q53FA7 332 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 CRIP3Q6Q6R5 217 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 LHFPL4Q7Z7J7 247 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 C1QL4Q86Z23 238 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 EGFL6Q8IUX8 553 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 ENTHD1Q8IYW4 607 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 C11orf44Q8N8P7 122 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 RPS4Y2Q8TD47 263 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 PP6455Q8WZ26 134 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 EME1Q96AY2 570 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 MALSU1Q96EH3 234 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 CENPNQ96H22 339 aaPredicted RBP7.94□□□□□ -1.14
VRK3-216ENST00000599342 SNX22Q96L94 193 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 OSBPL10Q9BXB5 764 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 CDCA4Q9BXL8 241 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 GLS2Q9UI32 602 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 FOXJ3Q9UPW0 622 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 TCF19Q9Y242 345 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 ORC6Q9Y5N6 252 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
VRK3-216ENST00000599342 TET2Q6N021 2002 aaPredicted RBP7.93□□□□□ -1.14
VRK3-216ENST00000599342 FAM90A8PA6NJQ4 464 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 ODF3BA8MYP8 253 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 F8VVB4 439 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 F8VWA3 439 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 PEX14O75381 377 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 MTCP1P56278 107 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 ACTC1P68032 377 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 ACTA1P68133 377 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 ZNF85Q03923 595 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 MEF2CQ06413 473 aaPredicted RBP7.93□□□□□ -1.14
VRK3-216ENST00000599342 GRK1Q15835 563 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 SSX2Q16385 188 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 ARSJQ5FYB0 599 aaPredicted RBP7.93□□□□□ -1.14
VRK3-216ENST00000599342 TMEM244Q5VVB8 128 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 ZNF626Q68DY1 528 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 LHFPL2Q6ZUX7 228 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 TRAPPC6BQ86SZ2 158 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 PRSS35Q8N3Z0 413 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 ZNF676Q8N7Q3 588 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 DNAAF1Q8NEP3 725 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 OR11H6Q8NGC7 330 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 CHST6Q9GZX3 395 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 FAM53CQ9NYF3 392 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 LINC00312Q9Y6C7 94 aa7.93□□□□□ -1.14
VRK3-216ENST00000599342 A0A0G2JK05 382 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 TRBV2A0A0J9YWF9 115 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 DAPL1A0PJW8 107 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 TMEM82A0PJX8 343 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 SNTNA6NMZ2 147 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 H3BUI4 141 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 F2RL2O00254 374 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 FBXO24O75426 580 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 IGHA1P01876 353 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 OPN1MWP04001 364 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 OPN1MW2P0DN77 364 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms