RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	PKIB	Q9C010	78 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	ABCB10	Q9NRK6	738 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	CLN6	Q9NWW5	311 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	MTCH1	Q9NZJ7	389 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	IL36RN	Q9UBH0	155 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	POMP	Q9Y244	141 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	SNX5	Q9Y5X3	404 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	DNAH3	Q8TD57	4116 aa		8.49	□□□□□ -1.05
LSM4-205	ENST00000597776	TMEM82	A0PJX8	343 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	DHRS7C	A6NNS2	312 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	ZAR1L	A6NP61	321 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	ADARB2-AS1	A8MUL3	147 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	PIN1P1	O15428	100 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	GYG2	O15488	501 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	IGHV1-8	P0DP01	117 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	CCL1	P22362	96 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	EFNB1	P98172	346 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	SLX4IP	Q5VYV7	408 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	NXNL2	Q5VZ03	156 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	C12orf73	Q69YU5	71 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	GDPD3	Q7L5L3	318 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	OR8H2	Q8N162	312 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	TPRX1	Q8N7U7	411 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	YIPF7	Q8N8F6	280 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	OR11H6	Q8NGC7	330 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	OR13D1	Q8NGV5	346 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	TMEM163	Q8TC26	289 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	R3HDM4	Q96D70	268 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	MALSU1	Q96EH3	234 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	NRBF2	Q96F24	287 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	MNT	Q99583	582 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	PRRG3	Q9BZD7	231 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	PLEKHA1	Q9HB21	404 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	KRT84	Q9NSB2	600 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	H2AFY2	Q9P0M6	372 aa	Predicted RBP	8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	SLC7A11	Q9UPY5	501 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	TBL2	Q9Y4P3	447 aa	Known RBP	8.48	□□□□□ -1.05
LSM4-205	ENST00000597776	HILPDA	Q9Y5L2	63 aa		8.48	□□□□□ -1.05
LSM4-205	ENST00000597776		A0A1W2PQL4	384 aa	Predicted RBP	8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	F2RL2	O00254	374 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	SYT7	O43581	403 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	IGHA1	P01876	353 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	RBP4	P02753	201 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	KRT8	P05787	483 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	CHRM2	P08172	466 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	CALCB	P10092	127 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	DUSP1	P28562	367 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	ACTR3	P61158	418 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	ACTA2	P62736	377 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	BLCAP	P62952	87 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	ACTG2	P63267	376 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	ACTC1	P68032	377 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	ACTA1	P68133	377 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	DNAL1	Q4LDG9	190 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	SLC25A26	Q70HW3	274 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	CATSPERD	Q86XM0	798 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	NDUFA11	Q86Y39	141 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	GID4	Q8IVV7	300 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	DTX3	Q8N9I9	347 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	OR4S1	Q8NGB4	309 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	WIPF2	Q8TF74	440 aa	Predicted RBP	8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	EMG1	Q92979	244 aa	Known RBP	8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	ZNF714	Q96N38	554 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	PRSS22	Q9GZN4	317 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	WNT10A	Q9GZT5	417 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	CHST6	Q9GZX3	395 aa		8.47	□□□□□ -1.05
LSM4-205	ENST00000597776	NOTCH3	Q9UM47	2321 aa		8.46	□□□□□ -1.05
LSM4-205	ENST00000597776	IGHV2-26	A0A0B4J1V2	119 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	LOC107986453	A0A1B0GWG9	222 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776		A0A1W2PRX2	142 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776		G3V2T6	193 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	XPNPEP2	O43895	674 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	PEX14	O75381	377 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	MMP23A	O75900	390 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	HAND1	O96004	215 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	GABRR1	P24046	479 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	VDAC2	P45880	294 aa	Predicted RBP	8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	NPBWR2	P48146	333 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	SNU13	P55769	128 aa	Known RBP	8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	OR12D2	P58182	307 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	EMX1	Q04741	257 aa	Predicted RBP	8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	SLC34A1	Q06495	639 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	GRK1	Q15835	563 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	ARSJ	Q5FYB0	599 aa	Predicted RBP	8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	BAIAP2L2	Q6UXY1	529 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	REC114	Q7Z4M0	266 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	EGFL6	Q8IUX8	553 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	PRSS35	Q8N3Z0	413 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	ZNF676	Q8N7Q3	588 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	OR10H4	Q8NGA5	316 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	OR52N4	Q8NGI2	321 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	NDNF	Q8TB73	568 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	MRAP	Q8TCY5	172 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	SGCD	Q92629	289 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	PHF21A	Q96BD5	680 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	SNX22	Q96L94	193 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	CHST5	Q9GZS9	411 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	RBFOX1	Q9NWB1	397 aa	Known RBP	8.46	□□□□□ -1.06

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